| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2689 |
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| Symbol | |
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| ID | 5540171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3472416 |
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| End bp | 3473360 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894811 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_001432778 |
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| Protein GI | 156742649 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.958123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTGGA CGCAGCGCAG GATCAATACG TTTCTGTTCG TGCTCATCCT GATCGGTTCA
CTGGCGGCTC TGGCTGATGT GCTGATGCGC GATGCTCTCC TGATGACGCG CGTGGGATAT
GCCGTCGCCG CCGCATCTAC CGGGATATTG CTGATCGCCT ACAGGCGCGG CTGGGAGTAT
GCTCGCCATC TGATGGCGCT TGGAATCGCG CTGGTGATTG CTGCGTTTAT CAACGAACCA
TACATTTCAC AGCAGATGGA CCTCTTGCAC GCGGTTCCCA TGGTGATAGC GCTGGTGCTC
ACCGGTCCGC GCTGGTTGCT GATCAATGCG GCGCTGCTGC TGGTCATCCT GCTCGTTCGC
GGCGAGTGGA GCGGCGTGTA CACCAAACCG GTCAACCTGG CAGCCTATGC GGTGCTTGCC
GGCGGCATGG CGCTCAGCCG GCTGGCGGTG GACAACGCAC AGCGTCTGGA AGCGGCGCGT
CGGATTGCCG AGGAAGAACG AGAGCGCGCG GCGAATGCGC TGACGCTCGC GCAGCAACGT
GCCAATGAAC TGGAACGACG CAATGCCGAA CAGGAGCAGT TGCTCCGGTT AATCTCGGAT
CTGGAAACAC CGGCGATCAC GATTGCCGAT GGCGTGCTGT TGGCGCCGGT GGTGGGTCGT
CTCGATGCGC GTCGCGCGCA GGCGCTGAAC AAACGGTTGC TGGAGACCGC CGCGCGCCAG
CGCGCGCGAC TGGTTATCCT CGATATTGCC GGCGTCTCGC ATGTTGATGA GTCGGTCGCC
AATAGTCTGA TTCAGACGGC GCAGGCGCTG CAACTGATCG GCTGTCGAGT AGCGGTCAGC
GGCATTTCCC CTGCGGTTGC CGCGCTTCTG GCGTCTTTAA GTATAACGCT TCCCGACCTC
ATCACCTGCC GTTCGCCACA AGATGCACTG ACATTGCACC TGTGA
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| Protein sequence | MGWTQRRINT FLFVLILIGS LAALADVLMR DALLMTRVGY AVAAASTGIL LIAYRRGWEY
ARHLMALGIA LVIAAFINEP YISQQMDLLH AVPMVIALVL TGPRWLLINA ALLLVILLVR
GEWSGVYTKP VNLAAYAVLA GGMALSRLAV DNAQRLEAAR RIAEEERERA ANALTLAQQR
ANELERRNAE QEQLLRLISD LETPAITIAD GVLLAPVVGR LDARRAQALN KRLLETAARQ
RARLVILDIA GVSHVDESVA NSLIQTAQAL QLIGCRVAVS GISPAVAALL ASLSITLPDL
ITCRSPQDAL TLHL
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