| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2677 |
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| Symbol | |
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| ID | 5540159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3459724 |
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| End bp | 3461067 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640894799 |
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| Product | RNA-directed DNA polymerase (Reverse transcriptase) |
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| Protein accession | YP_001432766 |
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| Protein GI | 156742637 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTTT TTCCCCGTTA CAACGGACCA CCGTTGCTGC CGCAGATTTG CAGCGTCGAA
AATCTGACGC TGGCGTGGCG GCGGGTGCGC AGCAACATCC ATGTCGCCCG GCGTGGGCGC
AGCGCCGGAC CGGATGCGGT GACGCTCCGC GATTTCGAGG CGGACTGGAC GCGTCAGATG
GCGCAACTGG CGGATGAATT GCAGCAAGGG ACGTATCGAC CGCTGCCCGC AAAGCGGATC
GCCATCCCCA AGGCGAGCGG CGGCGAACGC GCAATCGCCA TCCTGTCCGT GCGAGATCGG
GTGGCGCAGC GCGCCGTTCA ACAGGTGCTC GATCCGCTGT TTGATCCTTG TTTTCTAGAT
TGTTCCTACG GCTGCCGTCC ACACGTCGGC GTACCGGAGG CGGTGGCGCG TGTGCAACGC
TACGCCGACC AGGGGCTGGG ATGGGTGGTC GATGCCGATA TCGCCGGCTA CTTCGACGCC
ATCGATCAGC GGGTGCTGTT GGGGCTGGTG CGGCAGCGCA TCGACGAATT GCCGGTGCTC
AAACTGATCG CGCAGTGGCT CGAAGCCGGA ATGCTGCCTG GCGACGCGGC GCTGCCCGAC
GAGGCGCCGG CGACGCCACT GCAACACGGT GAAGCCGTAC TTCGGCAGGT GATGTCCTGG
GGCGCGGAGC GCCTGCCTCC ACCGCCGACC GGTCCCTACG CCGCAGCGGC GTGGGAAATG
CCGGGTGGCA GTGTAGACGA CGGCTGGACG GTGCGCCGGT CGGGACTGGA GTCGCATCTG
TGGACGGCGA TGATGCTGGC GCGACCGGCG ATCGATGGCG CACGGCGAGC GTTGCCCTAC
CTGCAACGGA TCGGCGCACG TCGGCTCGCT GTCGTCGGCG CGGTGGCGGT CGGTGCGCTG
GCATTGAGCG AAGCGGTTGC GCGCATGCAC ACCGCGCAGA GTCGTGGCAC GCCGCAGGGC
GGTGCGCTCT CGCCGCTTCT GGCGAACATC TATCTCCATC CGTTCGATGT GGCCATGACC
AGCCAGGGAT TCCGCCTGGC GCGCTTTGTG GACGACTTCG TGATCATGTG CGCAACGCAG
GACGAGGCGG AACGGGCGCT GAACTTCGCG CAGCAGCAAC TGCGCGTCCT GCGCCTCGAA
CTGAACGCCG AGAAAACGCG CATCGCATCC TACGCCAATG GGATCGAATT CCTCGGCGCA
TCCCTGGCAC CGCGCGCCAA AGGGCAGCGC CTGGGCGAAG GGCTGGTCGA TTTCGCCGAC
GCCGAACGCG TCCTGCGTGA CGCCATGCGC AATGCACGGC AACGGGTGCG GCGGAAGATC
GAACGTGGGA AAGTTGAAGG TTGA
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| Protein sequence | MPLFPRYNGP PLLPQICSVE NLTLAWRRVR SNIHVARRGR SAGPDAVTLR DFEADWTRQM
AQLADELQQG TYRPLPAKRI AIPKASGGER AIAILSVRDR VAQRAVQQVL DPLFDPCFLD
CSYGCRPHVG VPEAVARVQR YADQGLGWVV DADIAGYFDA IDQRVLLGLV RQRIDELPVL
KLIAQWLEAG MLPGDAALPD EAPATPLQHG EAVLRQVMSW GAERLPPPPT GPYAAAAWEM
PGGSVDDGWT VRRSGLESHL WTAMMLARPA IDGARRALPY LQRIGARRLA VVGAVAVGAL
ALSEAVARMH TAQSRGTPQG GALSPLLANI YLHPFDVAMT SQGFRLARFV DDFVIMCATQ
DEAERALNFA QQQLRVLRLE LNAEKTRIAS YANGIEFLGA SLAPRAKGQR LGEGLVDFAD
AERVLRDAMR NARQRVRRKI ERGKVEG
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