Gene Rcas_2675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2675 
Symbol 
ID5540157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3455933 
End bp3458266 
Gene Length2334 bp 
Protein Length777 aa 
Translation table11 
GC content61% 
IMG OID640894797 
Productvon Willebrand factor type A 
Protein accessionYP_001432764 
Protein GI156742635 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTTCG TTCGGTCGAT GCGTGTGGGC ATGGCAGTGA TGGCATTGTG GGTCTTTGGG 
GTATGGATGG TGTGGTTGCC CGGCGGCGCG CATAGTGCGA CAGGTTTTCC GCCCTCATCG
AGTTCGGCGT TTGTTTCACC GGCAACAGGT GTGAGCGAGA GCGGCGCCTC GACTCCATTC
AGGATTCTGC GCCCCTCGAC GCGACGACCG GTTGACGCCG GTTCACCGTT CCGTCCATCG
AAAATCGTCG TTGAACTCAT ATACCGAGGG TATGCTACGA AACAGGACAT CACCGTGACC
ATCGGCGGCA AACCGGCGAC TATCATCAGT CTTGTGCCGG TTCGCTATCT GATCGAAGTG
CAGGCGCCGC AGCAACCCGC GCAAGGACGC TACGATCTGG AAGTGACCGT CAAAGGCGTC
ACGGTGCGGG AACCGGGGGC AGTCACGTAC TTTGGCGTCA ATAATGCCAG CGTTATTCTG
ACGATCGACC GTTCGGGCAG CATGGGGACC GCCAAAATGG CGGCGGCGCG CGAAGCGGCG
CGTCAGTTCG TCGATCTTAT GCAGGCTGGC GACGGCATTG GCGTCGTCAG TTTCGACCAC
GTGATCGAAA CGCCCCTATC CCTGACAACC ATTGCCGAAG CGCCACTGCC GTCGGCATTC
CTCTTCAGCG ATAGCATGGA GACTGGCGCA AGTCGGTGGA TTGCGGCGCC GCCGTGGGGG
TTGACATCGG TTGCGCGCAA TAGCGCACAG GCATGGACCG ATAGCCCTGC CGGAAATTAC
GCGAACAACA CGAACAGCGC GCTCGAAATC GCCACGCCGA TTGCCATTCC CGCCTCGATG
ACTGCGCCCG CTCTGATGTT CTGGCATCGC TATGATATTG AAAACGGCTT TGATCGCGGC
GAGGTCGAGA TTTCCGCAAA CAACGGCGTC ACCTGGCAGC GTCTGCGATC ATTTACCGGT
ACAGCCTTAG GATGGCGGCG CGAGATGATC AGTCTCGACG CCTACCGTGG TCAGACGGTT
CGGGTGCGCT TTCGGTTGGT GACCAACGCC TTCGGCGTTC GCGATGGCTG GTATATTGAT
GATGTCGCCC TTGGTCCCGC GTGGGACGAC GTGCGCGCCA GAGCGCAGGC GGCCATCGAC
ACGCTGAACA GTCGCGGGGC CACCTCGATC GGCGGCGGAT TGCAGCGCAG CCAGCATCTG
CTCACGAGCG CCAACCCCGC CATTCCGCGC GCGATTGTGC TATTGAGCGA TGGACAGGAG
AATACGTCGC CCTACGTCGC CGATGTGCTG CCGCCGATCC GTGATGCGCA AACGACGGTT
CACACCATCG GGGTGGGGCA GGATGCCGAT CAGCGGTTGA TGCTGTCAAT TGCGGCGCAG
ACCGGCGGAA CCTACAATTA TGCGCCAACG CCCGATCAAC TTGCGCGGAT TTACAACACG
ATTTCCGGCA ACGTCAGCAA CCGCCAGACG CTGGCGACGG CGAACGGAAG CGTTGCGCCT
AGCGCCGTTG TGACCCAGGA GGTGACGATT GATCCGTCGA TCGCAGAGGC GACCTTCTGG
GTCGGCTGGA CAAACCCCGG CATCGGGGTT GCCCTGACGT TGCAGATGCC TTCCGGCGTC
AGCATCGATC CCGCCACGCC GACCACAAAT TCGGATGTTG TCTACGTCTC CGGCGACACC
TATGCCTATT ACCGCGTGCG CACACCGACG CTTACGCCAG GCGTATGGCG AATGCGCGTC
AGCCGCGCCG CTTCGTCGCC GGGCATCGTT GCAGCAGAAG CGCTGCCATC TGAGGTCGCA
GGGGAAGAAC ACCTGGAACC GGAGGTTGAA AACGGGATTG CGCCGGTTGA TTCATTGCGA
GAAGCGCGCA GCGTCGAACC TGACGAACCG GCTGCGCCAC CGGCGTTACC GGCGTCAACC
GACGAACCGT TTGTGGTACG TGCCACGGCG CGTGCCGACC TGACGCTCGG CTTCTATCCC
GACAAAACCG AGTATCTGAC AACCGAACCG ATTATCGGCT TCGTCACCCT GGCAGACGAT
GCGCCGATAA CTGGCGCGAA TGTGTTGCTC AGCGTGCAGT ATCCTGGCCA GACGACGCCA
TTCACCGTGC CGATGCACGA CGACGGATTG CACGGCGACG GCGCGGCCGG CGATGGGGTC
TATGCGGTGT TGCTGCTCGG ACCGCGTGAA CCTGGCACGG TGACATTCAC CGTGACCGCG
AGCGGATCGT CCAGACAAGG CGAACCGTTT GTCCGACAGG CGGAACTTTC GACCTTTATC
GTCGCCAATC CCAACCCGTA CACCCTGGTG CATCTCCCGC TGGTTGCGCG CTAG
 
Protein sequence
MVFVRSMRVG MAVMALWVFG VWMVWLPGGA HSATGFPPSS SSAFVSPATG VSESGASTPF 
RILRPSTRRP VDAGSPFRPS KIVVELIYRG YATKQDITVT IGGKPATIIS LVPVRYLIEV
QAPQQPAQGR YDLEVTVKGV TVREPGAVTY FGVNNASVIL TIDRSGSMGT AKMAAAREAA
RQFVDLMQAG DGIGVVSFDH VIETPLSLTT IAEAPLPSAF LFSDSMETGA SRWIAAPPWG
LTSVARNSAQ AWTDSPAGNY ANNTNSALEI ATPIAIPASM TAPALMFWHR YDIENGFDRG
EVEISANNGV TWQRLRSFTG TALGWRREMI SLDAYRGQTV RVRFRLVTNA FGVRDGWYID
DVALGPAWDD VRARAQAAID TLNSRGATSI GGGLQRSQHL LTSANPAIPR AIVLLSDGQE
NTSPYVADVL PPIRDAQTTV HTIGVGQDAD QRLMLSIAAQ TGGTYNYAPT PDQLARIYNT
ISGNVSNRQT LATANGSVAP SAVVTQEVTI DPSIAEATFW VGWTNPGIGV ALTLQMPSGV
SIDPATPTTN SDVVYVSGDT YAYYRVRTPT LTPGVWRMRV SRAASSPGIV AAEALPSEVA
GEEHLEPEVE NGIAPVDSLR EARSVEPDEP AAPPALPAST DEPFVVRATA RADLTLGFYP
DKTEYLTTEP IIGFVTLADD APITGANVLL SVQYPGQTTP FTVPMHDDGL HGDGAAGDGV
YAVLLLGPRE PGTVTFTVTA SGSSRQGEPF VRQAELSTFI VANPNPYTLV HLPLVAR