| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2675 |
|---|
| Symbol | |
|---|
| ID | 5540157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 3455933 |
|---|
| End bp | 3458266 |
|---|
| Gene Length | 2334 bp |
|---|
| Protein Length | 777 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640894797 |
|---|
| Product | von Willebrand factor type A |
|---|
| Protein accession | YP_001432764 |
|---|
| Protein GI | 156742635 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTTCG TTCGGTCGAT GCGTGTGGGC ATGGCAGTGA TGGCATTGTG GGTCTTTGGG
GTATGGATGG TGTGGTTGCC CGGCGGCGCG CATAGTGCGA CAGGTTTTCC GCCCTCATCG
AGTTCGGCGT TTGTTTCACC GGCAACAGGT GTGAGCGAGA GCGGCGCCTC GACTCCATTC
AGGATTCTGC GCCCCTCGAC GCGACGACCG GTTGACGCCG GTTCACCGTT CCGTCCATCG
AAAATCGTCG TTGAACTCAT ATACCGAGGG TATGCTACGA AACAGGACAT CACCGTGACC
ATCGGCGGCA AACCGGCGAC TATCATCAGT CTTGTGCCGG TTCGCTATCT GATCGAAGTG
CAGGCGCCGC AGCAACCCGC GCAAGGACGC TACGATCTGG AAGTGACCGT CAAAGGCGTC
ACGGTGCGGG AACCGGGGGC AGTCACGTAC TTTGGCGTCA ATAATGCCAG CGTTATTCTG
ACGATCGACC GTTCGGGCAG CATGGGGACC GCCAAAATGG CGGCGGCGCG CGAAGCGGCG
CGTCAGTTCG TCGATCTTAT GCAGGCTGGC GACGGCATTG GCGTCGTCAG TTTCGACCAC
GTGATCGAAA CGCCCCTATC CCTGACAACC ATTGCCGAAG CGCCACTGCC GTCGGCATTC
CTCTTCAGCG ATAGCATGGA GACTGGCGCA AGTCGGTGGA TTGCGGCGCC GCCGTGGGGG
TTGACATCGG TTGCGCGCAA TAGCGCACAG GCATGGACCG ATAGCCCTGC CGGAAATTAC
GCGAACAACA CGAACAGCGC GCTCGAAATC GCCACGCCGA TTGCCATTCC CGCCTCGATG
ACTGCGCCCG CTCTGATGTT CTGGCATCGC TATGATATTG AAAACGGCTT TGATCGCGGC
GAGGTCGAGA TTTCCGCAAA CAACGGCGTC ACCTGGCAGC GTCTGCGATC ATTTACCGGT
ACAGCCTTAG GATGGCGGCG CGAGATGATC AGTCTCGACG CCTACCGTGG TCAGACGGTT
CGGGTGCGCT TTCGGTTGGT GACCAACGCC TTCGGCGTTC GCGATGGCTG GTATATTGAT
GATGTCGCCC TTGGTCCCGC GTGGGACGAC GTGCGCGCCA GAGCGCAGGC GGCCATCGAC
ACGCTGAACA GTCGCGGGGC CACCTCGATC GGCGGCGGAT TGCAGCGCAG CCAGCATCTG
CTCACGAGCG CCAACCCCGC CATTCCGCGC GCGATTGTGC TATTGAGCGA TGGACAGGAG
AATACGTCGC CCTACGTCGC CGATGTGCTG CCGCCGATCC GTGATGCGCA AACGACGGTT
CACACCATCG GGGTGGGGCA GGATGCCGAT CAGCGGTTGA TGCTGTCAAT TGCGGCGCAG
ACCGGCGGAA CCTACAATTA TGCGCCAACG CCCGATCAAC TTGCGCGGAT TTACAACACG
ATTTCCGGCA ACGTCAGCAA CCGCCAGACG CTGGCGACGG CGAACGGAAG CGTTGCGCCT
AGCGCCGTTG TGACCCAGGA GGTGACGATT GATCCGTCGA TCGCAGAGGC GACCTTCTGG
GTCGGCTGGA CAAACCCCGG CATCGGGGTT GCCCTGACGT TGCAGATGCC TTCCGGCGTC
AGCATCGATC CCGCCACGCC GACCACAAAT TCGGATGTTG TCTACGTCTC CGGCGACACC
TATGCCTATT ACCGCGTGCG CACACCGACG CTTACGCCAG GCGTATGGCG AATGCGCGTC
AGCCGCGCCG CTTCGTCGCC GGGCATCGTT GCAGCAGAAG CGCTGCCATC TGAGGTCGCA
GGGGAAGAAC ACCTGGAACC GGAGGTTGAA AACGGGATTG CGCCGGTTGA TTCATTGCGA
GAAGCGCGCA GCGTCGAACC TGACGAACCG GCTGCGCCAC CGGCGTTACC GGCGTCAACC
GACGAACCGT TTGTGGTACG TGCCACGGCG CGTGCCGACC TGACGCTCGG CTTCTATCCC
GACAAAACCG AGTATCTGAC AACCGAACCG ATTATCGGCT TCGTCACCCT GGCAGACGAT
GCGCCGATAA CTGGCGCGAA TGTGTTGCTC AGCGTGCAGT ATCCTGGCCA GACGACGCCA
TTCACCGTGC CGATGCACGA CGACGGATTG CACGGCGACG GCGCGGCCGG CGATGGGGTC
TATGCGGTGT TGCTGCTCGG ACCGCGTGAA CCTGGCACGG TGACATTCAC CGTGACCGCG
AGCGGATCGT CCAGACAAGG CGAACCGTTT GTCCGACAGG CGGAACTTTC GACCTTTATC
GTCGCCAATC CCAACCCGTA CACCCTGGTG CATCTCCCGC TGGTTGCGCG CTAG
|
|---|
| Protein sequence | MVFVRSMRVG MAVMALWVFG VWMVWLPGGA HSATGFPPSS SSAFVSPATG VSESGASTPF
RILRPSTRRP VDAGSPFRPS KIVVELIYRG YATKQDITVT IGGKPATIIS LVPVRYLIEV
QAPQQPAQGR YDLEVTVKGV TVREPGAVTY FGVNNASVIL TIDRSGSMGT AKMAAAREAA
RQFVDLMQAG DGIGVVSFDH VIETPLSLTT IAEAPLPSAF LFSDSMETGA SRWIAAPPWG
LTSVARNSAQ AWTDSPAGNY ANNTNSALEI ATPIAIPASM TAPALMFWHR YDIENGFDRG
EVEISANNGV TWQRLRSFTG TALGWRREMI SLDAYRGQTV RVRFRLVTNA FGVRDGWYID
DVALGPAWDD VRARAQAAID TLNSRGATSI GGGLQRSQHL LTSANPAIPR AIVLLSDGQE
NTSPYVADVL PPIRDAQTTV HTIGVGQDAD QRLMLSIAAQ TGGTYNYAPT PDQLARIYNT
ISGNVSNRQT LATANGSVAP SAVVTQEVTI DPSIAEATFW VGWTNPGIGV ALTLQMPSGV
SIDPATPTTN SDVVYVSGDT YAYYRVRTPT LTPGVWRMRV SRAASSPGIV AAEALPSEVA
GEEHLEPEVE NGIAPVDSLR EARSVEPDEP AAPPALPAST DEPFVVRATA RADLTLGFYP
DKTEYLTTEP IIGFVTLADD APITGANVLL SVQYPGQTTP FTVPMHDDGL HGDGAAGDGV
YAVLLLGPRE PGTVTFTVTA SGSSRQGEPF VRQAELSTFI VANPNPYTLV HLPLVAR
|
|---|
| |