| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2671 |
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| Symbol | |
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| ID | 5540153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3443934 |
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| End bp | 3446312 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894793 |
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| Product | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD |
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| Protein accession | YP_001432760 |
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| Protein GI | 156742631 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.342561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.283165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCGCC TGGTTGTGAC CATTGCGTTG ATCGGCATGA TGATCGGCAT CACTCCGTCA
CAGGCGTTCG CACAGGTGCC GGTGCAGTCG GGGCGGATTG TGTTCAGCAC TCAGGCGGAC
TGGCAGCGCG GGACGCGCAC TGATGTGCAG ATTATCACGA ATGCCGACGG CGAACTGCGC
CTGGAGCGTG GCGCGACTCG CGGTACGTTC GTCTCTGAAC CGATTGCTCT GACCACGACC
CTGAATGCCG CCGGCGTCGT CTGGCACGCC GATGTTCCGC CCGGTACGAC ACTGACCCTC
GAACTTCGCG GCGGTCCTGC TCCCGATCAA CCGGGTCCCT GGCAGCCACT GACGGCTGGC
GAACTGCGCG CTCGATCAAC CCCGGACGCT TTTGCGATTG AAGGGGTGCG CCCGCTGCCA
TCCGATACGC GTGTCTTGCA ATTTCGCGCC ACATTCAGCA CGACTGTCCC AAACGCTTCG
CCAATCTTGA GCGATGTCAG CATCAGTTAC TTCGACACAA GCGCCGGTCC GCCGCGCGCG
ATCAATGCCG TTCCCGCAGT TGGCGGACCC GCAACGCTGA CAGTGCCGCC GAAACTGTTT
CCACGTACCT CGTGGGCAGG CGGCAACCCG CGCGCGTACC GCGGACCGCG CGAGGCGCCG
CAGGGGATCG TGCTTCATCA GATCGGCGCC GATGCCCTCG ACGATTCGCT GCCATTCCTG
CGCGCGCTCG CTGTGTACCA CGAACAGACA CTCGGCTTGA ACGATACGGT TTATCACTAT
ATCATCGGGC GTGATGGCGC AATCTTTGAG GGGCGGAGCG GTGGACCAAC CGCCTCAGTC
GCTGAATTGA GCGGTGGCGC CGCAGTACAC ATTGCGCTGA TCGGTGAAGG GGCGCCACCC
GCAGCCCAAT TCGACGCGCT CCGCGCCTTG CTGGCATGGC TGTGTGATGC GTACCGTCTC
GAACCGTCCG GGCAACGAGT CATCACGCTC AATGGGTCCA GCGTTGTCGG TCCCACCATC
GCCGCGCACA GTGACCTGGC GCCTTCTGCT GGCGATCCCT CGAATGCGCT GCGCGACGCC
CTGCCTCAGA TTCGACAGTC GGTCAGTGCT GCGATGGTGC GTTCTCGCTG GTTTTTTGCC
GAGGGAAATC CGCGCGATTA CGAAGAACGA CTGGCAGTGC TCAATCCTGG CAGCGAACCT
GCCACGGTGC GTTTCATCAT TGTGCGACAG CCAGGCGTCG AGGTTATCCG CGAGACGACG
GTTGCGCCGG GTGCGCGCGC TAACCTCGTG ATCAACCAGG TCTTCAACGA TACATCCGAT
GCTCCTGCAA TCGTTGAGTC GAATGCCCCG ATTATTGCAG AACGCTTCAT GAATTTTGGC
GCCGATCTGA GCCTTCAGCC AGGTGTGGCG CACCCGTCGC GCGTCTGGTA TTTCGCCGAA
GGTTCAACCG AAGGTGATAA ACGCACGTTT CTGGTGCTGT TCAATCCGCA ATCCGAGCCG
GTCGGCGCGC GCGTGTTGCT GATTACGAAT GATGGAACGA CGTTTGTGTA TCCGCCGTTC
GATAGCGAGC CGGTGGTGCT GCTGCCCCGG CAGCGGACGG TCATCGTGAT GGGCGATCTG
CTGCCGAATG CCTCGTTTGG GATGCGAGTC ACCGCCAGCC AGCCAATTGT TGCCGAACGC
ACGATGATCT TTGGTCCTGG CAGCACACTT ACCAGCGGGG GAATGCACAT ATCGCCGGGG
ATGACCGAAC TCTCGCGGGA GTGGCACTTT GCAGAGGGAA CGACGGCGCC ACCATTTCGG
ATGTCGCTGC TGGTGCTCAA TCCGAATGGC GACCGCGCGA ATGTTACCGT GCGCTTCCTG
ACCCCCGACG GCACATCGCT GGCGCGGCGC TACGCTATTC CGCCGCTCGC GCGCCTGTCA
ATCGATGTCA ACGACGTTGT GCCAGAACTG GGAGTCGCAA CAACCATCAT CGCTGATCGC
CCGGTCGCGG CTGAGCGGGC GCTCTACTGG CGCAACGATG CAGCAGGAAC AGCGGGACCA
GGAGTGATGG CGCCCGCCTA CTCGTGGCGC TTTGCCGACG GTCGCACCGG CGGCGATTAT
CAGCAGTATC TGTTGATCAG CAATCCATCG CGCAGCCAGG CGCGCATCGA TGTTGCCTTT
ATTCTGGCAG ACGGCTCACG CGCGAGCCGG TCGCTGGTGA TGCCCGCCGG TTCGCGGTAT
ACGATGGCGG TTCACGAACT GTTCCCCGAT CAGACGATCA TTTCTGCAAC GGTGCGTGCG
ACGCAGCCGG TGGTGGTGGA ACGTTCGATC TACGCAGGAC CTCCAGCCGC TACGACCAAT
CGCGGCGGTG AAACATCACC TGGCGTGCCG GGTGATTGA
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| Protein sequence | MHRLVVTIAL IGMMIGITPS QAFAQVPVQS GRIVFSTQAD WQRGTRTDVQ IITNADGELR
LERGATRGTF VSEPIALTTT LNAAGVVWHA DVPPGTTLTL ELRGGPAPDQ PGPWQPLTAG
ELRARSTPDA FAIEGVRPLP SDTRVLQFRA TFSTTVPNAS PILSDVSISY FDTSAGPPRA
INAVPAVGGP ATLTVPPKLF PRTSWAGGNP RAYRGPREAP QGIVLHQIGA DALDDSLPFL
RALAVYHEQT LGLNDTVYHY IIGRDGAIFE GRSGGPTASV AELSGGAAVH IALIGEGAPP
AAQFDALRAL LAWLCDAYRL EPSGQRVITL NGSSVVGPTI AAHSDLAPSA GDPSNALRDA
LPQIRQSVSA AMVRSRWFFA EGNPRDYEER LAVLNPGSEP ATVRFIIVRQ PGVEVIRETT
VAPGARANLV INQVFNDTSD APAIVESNAP IIAERFMNFG ADLSLQPGVA HPSRVWYFAE
GSTEGDKRTF LVLFNPQSEP VGARVLLITN DGTTFVYPPF DSEPVVLLPR QRTVIVMGDL
LPNASFGMRV TASQPIVAER TMIFGPGSTL TSGGMHISPG MTELSREWHF AEGTTAPPFR
MSLLVLNPNG DRANVTVRFL TPDGTSLARR YAIPPLARLS IDVNDVVPEL GVATTIIADR
PVAAERALYW RNDAAGTAGP GVMAPAYSWR FADGRTGGDY QQYLLISNPS RSQARIDVAF
ILADGSRASR SLVMPAGSRY TMAVHELFPD QTIISATVRA TQPVVVERSI YAGPPAATTN
RGGETSPGVP GD
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