| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2666 |
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| Symbol | |
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| ID | 5540148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3437135 |
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| End bp | 3438253 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640894788 |
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| Product | ABC-type sugar transport system periplasmic component-like protein |
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| Protein accession | YP_001432755 |
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| Protein GI | 156742626 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.157111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCC GACAATTCGC ACTGTTTGCG ATCACGCTCA TGCTCGCCAC CCTGATTGCG
GCATGCGGCG GAACGCCCAC CACCACCGCA CCGACCGCTG CGCCAGCGCC ACAACCCACG
ACGGCGCCAG CGCCCGAGGG CAGAAAGTTC ACAATCGGCA TCTCCAACCC GTTCATCAGC
AGCGAATACC GCACCCAGAT GATCCAGTCG TTGATCGAGG TCAATAAGGA ATACATGGAA
CGGGGGATCA CCAACGAACT CGTGATCGAG AGCGCCGATA CCGATGTCGC CGGTCAGATC
CAGCAATTGC AGAATCTCAT TAACAAAGGG GTCGATGCCA TCCTGGTGAA CCCCAGCGAT
GTCAATGGTC TTAACGACAC GCTTCAGGAA GCGATCAACA AGGGGATCAT CGTCATCTCG
GTCGATCAGG AACTGAACAC CCCCGGCGTC TACAACGTCG GCATCGATCA GAAGGAATGG
GCGAAGATTT CAGCCCGCTG GCTGGCGGAG AAGCTTGGCG GACAGGGAAA TATTGTGCTG
ATCGAGGGCT TCCCCGGGCA TCCGGCGAAC GTTGCGCGCA TGGAGGGCGT CGAGGAAGTG
CTGAAGGAGT ATCCCAATAT CAAGGTGCTA GGGCGTGAAA CCGGCAAGTG GGACGAAGCC
ACCGGTCAGC AGGTGATGTC GAACTTCCTG GCGTCGTTCC CCAATCTCGA CGGCTACTGG
ACGCAGGATG GCATGGCGAT TGGCGCGATG CAGGCGGTGA TGGCCGCCAA CCCGTCGAAG
TGGCCCGTGC TCGTCGGCGA GGGGCGCTGC CAGTTCTTGC AGTTGTGGGA TCAGCGCCTG
AAGGAAGACC CCAACTTCGA GACGATTGCC GTCGCCAATC CGCCCGGCGT ATCGCCAACC
GGTCTGCGCA TTGCCATCAA TATGCTTCAG GGCAAGCAGG TGGACAAGAG TAAACTTGGA
GGGGCGAATG GACTGTCGTT CGTCATTCCG GTGCCGGTGA TTGTGACGAA AGACAATTTC
CAAGAGGTGT TCACCACAGT GTGCAAGGAT AAGCCGGCCA CCTACCTGCT CGACGGCATT
ATGACCGACG AGGAAGTGCA GCAGTTCTTC GTGAAGTAG
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| Protein sequence | MKRRQFALFA ITLMLATLIA ACGGTPTTTA PTAAPAPQPT TAPAPEGRKF TIGISNPFIS
SEYRTQMIQS LIEVNKEYME RGITNELVIE SADTDVAGQI QQLQNLINKG VDAILVNPSD
VNGLNDTLQE AINKGIIVIS VDQELNTPGV YNVGIDQKEW AKISARWLAE KLGGQGNIVL
IEGFPGHPAN VARMEGVEEV LKEYPNIKVL GRETGKWDEA TGQQVMSNFL ASFPNLDGYW
TQDGMAIGAM QAVMAANPSK WPVLVGEGRC QFLQLWDQRL KEDPNFETIA VANPPGVSPT
GLRIAINMLQ GKQVDKSKLG GANGLSFVIP VPVIVTKDNF QEVFTTVCKD KPATYLLDGI
MTDEEVQQFF VK
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