| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2664 |
|---|
| Symbol | |
|---|
| ID | 5540146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 3434437 |
|---|
| End bp | 3434880 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640894786 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001432753 |
|---|
| Protein GI | 156742624 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.213222 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA CGACGCTCCG GGTGCTCCTG GTTGAGGATA ACGACGATCA CGCTGAACTG
ATCCGGCGCA CGCTCAACGA GCAGCAGAGG ACGCCACAGA TTGTGCATGT CAGCGATGGC
GAGAGTGCGC TCGATTACCT GCACCGCCGT GGAGCATGGA TCGATCCGGC ACAGAGTCCT
CGTCCGCACG TCATTCTGCT CGATCTGCGC CTGCCGCGCG TTGATGGTCT CGACGTCTTG
ATGAACATCA AACAGTCGGC GGATTTGCGC CGCATTCCGG TGGTGGTGCT GACCACATCC
TCAGCAGAGC GCGACGTGAC CCGCGCCTAC GATGCGCATG CGAACAGTTA TCTGGTCAAG
CCATTCGGCT TCGAGGACTT TCGCAACCTG ATGCATGATG TTGGGGTGTA CTGGTTGATG
CGTAATACCG TTGCTCACCT ATAA
|
|---|
| Protein sequence | MTDTTLRVLL VEDNDDHAEL IRRTLNEQQR TPQIVHVSDG ESALDYLHRR GAWIDPAQSP
RPHVILLDLR LPRVDGLDVL MNIKQSADLR RIPVVVLTTS SAERDVTRAY DAHANSYLVK
PFGFEDFRNL MHDVGVYWLM RNTVAHL
|
|---|
| |