| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2663 |
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| Symbol | |
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| ID | 5540145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3432333 |
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| End bp | 3434471 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640894785 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001432752 |
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| Protein GI | 156742623 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0547872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGATG TGCACAGGTC ATTGGTATCA GATATGAGGA TGAAACCATT GATTGTACGC
ATGTTTCAGC CACCGCGTTT CGATGATGAA GATCAGACAC GCATCGCGCA GACCCAGCAT
CTGCTCCTGC TCGTCTGTCT GACAATTGCG CTGATTGCCG CGACGATCAA TGCCGCTCTT
GGGCGCTCAA CCTCGACGAT TGCTTTGCTG ATCAGCGCTG GGGTGGCTTT GATCGCGCTT
TTGCTGTTGT ATGCGCGCCG CCTGCGTCTA TCAATTGCGC TTCTGCTTAG TCTTTTCATT
GGGTTGACCG CCTCGCTCCA GGTGATCGGT CGCGGCGCCC ACGACACGGT CACCGGTCTC
TATGCGGCGG TCATTGTCAT CGGCAGCCTC CTGCTCGACC GCCGCGCATT CATCGGGATG
GTCGCGGTGA TCATGCTGGT CATCGCCGGG ATTGTGACGG CGGAAATGTA TGGCTGGACC
CGGTCTCCCT ACGAAAGCGA ACCGGGCGAC TGGTTCGATC TGGCGCTTAT TCTGGGACTG
ACGGCATTCG CCGCGCGGTT GTTGAGTGAA AGCCTGCAAC GCAGCCGCGC GCTGGCGCGC
GCGCACGCGA AGACGCTGGC AGCGCAGGCA GCCGCATTGC GCGCTTCGGA GGAACGTTAC
CGCATTCTGG CGGCGAATCT GCCCGACAGC GCCGTGCTGA TTTTCGATCA CGATCTGCGA
TTCGTCCTGA GTGAAGGACC GGAACTCGCT GCAACCGGTT ACTCGAAAGC GGCGCTCGAA
GGACGCACGC TCTACGAAGC GCTGCCTCAC GCATTCGCCG CACAGGTCGA AGGAAACATC
CGCGCCGTTT TGAGCGGTCG CCGCTTCTCA GCGGAGATCC CCTACGAAGA CCGCATCTAC
CACTATCATT ATGTTCCGCT GATCGACGAC AGCGGGGCAG TGCGGTACGG CATGATCCTG
GCGCGTAATG TGACGGAGCA GCGCCGGGCG CAGATGGCGC TCCAGGAGCG CGAAGCGCAA
CTTCGGTTGA TCACCGAAAA TATGGGTGAC GCAATCACGC AACTGAATGC AGCGTTCACC
GTTATCTACG CCAGCCCGTC GGTGCAGCGC GTGTTCGGCT ATCTTCCCGA AACCATCAAT
GGAGCATCCA TTTCCGTATT GATCCACCCC GATGATGCAC CGGGCGTAAC CATGGCGCTC
AAACGCATAC GGGATGAAGG TGCATCCGCC ACGCGCATCG AGTATCGTGG CCGCAGTGAT
CACTGCCGCT GGCTCGAGTC GGAGATTCGC GCGCTCTATG GCACGAACGG TCAGTTTACC
GGCGCCATCC TCACCACGCG CGATGTGACC GAACGCAAAC AGATCGAAGT GGAGCGCGAG
CGCCTGATTG CCGAACTTGA ACAAAAAAAC GCCGAACTCG AACGTTTCAC CTACACCGCC
TCGCACGACC TGAAGAGTCC GCTGATCACC ATCCAGGGAT TTCTCGGTTA TCTGGAACGC
GACGCACAGG AAGGCAACAC GAAACGGATG CAGGACGACA TCCGGCGGAT CGGTGCAGCG
GTGCACAAAA TGGAGCGCCT GTTGAACGAT CTGCTGGAAC TGTCGCGGAT CGGGCGCGTG
AGCGCCGCAC CGCAATACGT GCCGTTCAAT GTTGTGGTGC AGGAGGCGCT CGAATTGCTT
GTCGGCAGGA TCGCCGAACG ACAGGCGCGC ATCAGTGTCG CTCCTGAGAT GCCCGTTGTG
TACGGCGAGC GGACACGCCT GGTCGAAGTG GTTCAAAACC TGGTTGATAA TGCGCTCAAG
TTCTGCGATA ATCAATATAC GCCCGATATT ACGATCGGTG TGCTGCGCGA GTCGCAGGGT
TCGTCGATCT TCTTCGTGCG CGACAATGGC ATCGGGATCG AACCGAAATA CCACGAGCAG
ATCTTCGGAC TGTTCAACAA ACTCGATCCG CGTAGCGCAG GCACAGGCGT TGGGCTGACG
ATTGTTCGTC GCATTATCGA AGTTCACGGC GGGCGTATCT GGGTCGAATC AGGCGGACCA
GGCAGTGGCG CTACCTTCTA CTTCTCGCTC CCCATCGCAG CCACACCAGT GCAGGAGGTG
AGCCATGACC GACACGACGC TCCGGGTGCT CCTGGTTGA
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| Protein sequence | MPDVHRSLVS DMRMKPLIVR MFQPPRFDDE DQTRIAQTQH LLLLVCLTIA LIAATINAAL
GRSTSTIALL ISAGVALIAL LLLYARRLRL SIALLLSLFI GLTASLQVIG RGAHDTVTGL
YAAVIVIGSL LLDRRAFIGM VAVIMLVIAG IVTAEMYGWT RSPYESEPGD WFDLALILGL
TAFAARLLSE SLQRSRALAR AHAKTLAAQA AALRASEERY RILAANLPDS AVLIFDHDLR
FVLSEGPELA ATGYSKAALE GRTLYEALPH AFAAQVEGNI RAVLSGRRFS AEIPYEDRIY
HYHYVPLIDD SGAVRYGMIL ARNVTEQRRA QMALQEREAQ LRLITENMGD AITQLNAAFT
VIYASPSVQR VFGYLPETIN GASISVLIHP DDAPGVTMAL KRIRDEGASA TRIEYRGRSD
HCRWLESEIR ALYGTNGQFT GAILTTRDVT ERKQIEVERE RLIAELEQKN AELERFTYTA
SHDLKSPLIT IQGFLGYLER DAQEGNTKRM QDDIRRIGAA VHKMERLLND LLELSRIGRV
SAAPQYVPFN VVVQEALELL VGRIAERQAR ISVAPEMPVV YGERTRLVEV VQNLVDNALK
FCDNQYTPDI TIGVLRESQG SSIFFVRDNG IGIEPKYHEQ IFGLFNKLDP RSAGTGVGLT
IVRRIIEVHG GRIWVESGGP GSGATFYFSL PIAATPVQEV SHDRHDAPGA PG
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