Gene Rcas_2650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2650 
Symbol 
ID5540132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3416443 
End bp3417504 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content62% 
IMG OID640894773 
Producthypothetical protein 
Protein accessionYP_001432740 
Protein GI156742611 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACG AACGCCTCCG CGCTGCGCGA GCGCGGCTTA TGGTGCGCCG CCTGGCGCCA 
TCGTTCCTCT ACAACCCCGC CTACCGCGTT AGTATGGTCG ATTTCGGCAT TCCGATCCGC
GCCGAAGCTG CCGACGAACG TCCGACAATT CGCTTTCACG TGCCGCAAAA ACTCTCACGC
ACGCAACTCG AGCGCGCCGG CATCGAAGCA GTGCCGCGAC AGATCGGCGA ATTTGTCACC
GATGTTATTG AAGGCGCTTA TGTGCCACAT ATCTGGAACT GGTGGTATCC CCCGCAACCG
CCTACTGGTG GTGCTCGGGC GCGGCACGAT CCAATGCGTG GCGGGATCAG CATATCGGTT
GCGCGTGACT ACAGCGCCGG CACACTCGGC GGGCTGGTGC GCGATCGCGC CACCGGTGAG
TTAATGATCC TGAGCAACTG GCATGTGCTC GCCGCCGAAC GCTGGGTTGC CGCCGGGTTG
CCGATCTGTC AACCGGGACG ACTCGACGGC GGCATGCCCT ATGACATCGT CGCAACGACG
ATGCGCCATG CGATGCGACA GAAGATCGAT GCCGCCGTGG CAACGCTCAC CGGCGATCGT
TCGTTAGTCA ACAACCAGCT GAATATTGGT TCGGTCACCG GCGTGGCGCT CCCGCGCCTC
GGCATGCGCA TCACCAAGTC TGGGCGCACA ACCGGCGTCA CTGAAGGGAT CATTACCGGA
GTTGAAGGAC AAACGCGGTT GTGGTATGGT TCTATGCAGC GCACCATTGA GCACGTTATG
ACCATCGTTC CCACCCCTGG AAAGCGCGAA GTCAGCGCAG GAGGCGATTC CGGGTCGTGG
TGGCTCGATG CTGACACATA CGCGGCGGTC GGGTTGCACT TCGCCGGCAG TGACGATCCG
GAGCAGGCGC TGGCAATCGA TATGCTGAGC GTTCTCGACG CGCTGAACGT CGAGATTGTC
ACCGAACGAA CGTCGGTGAC CGATCGACGC CGACCGGAAG CCGCCGTGCG CGAGGCGTGG
CAGGCGGTCG AACGCGAAAT GCTGGAGACG CTGGCGCGAT GA
 
Protein sequence
MDDERLRAAR ARLMVRRLAP SFLYNPAYRV SMVDFGIPIR AEAADERPTI RFHVPQKLSR 
TQLERAGIEA VPRQIGEFVT DVIEGAYVPH IWNWWYPPQP PTGGARARHD PMRGGISISV
ARDYSAGTLG GLVRDRATGE LMILSNWHVL AAERWVAAGL PICQPGRLDG GMPYDIVATT
MRHAMRQKID AAVATLTGDR SLVNNQLNIG SVTGVALPRL GMRITKSGRT TGVTEGIITG
VEGQTRLWYG SMQRTIEHVM TIVPTPGKRE VSAGGDSGSW WLDADTYAAV GLHFAGSDDP
EQALAIDMLS VLDALNVEIV TERTSVTDRR RPEAAVREAW QAVEREMLET LAR