Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2643 |
Symbol | |
ID | 5540125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3406755 |
End bp | 3407165 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640894766 |
Product | hypothetical protein |
Protein accession | YP_001432733 |
Protein GI | 156742604 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0187479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAAC GACGCGGCGG CATCAAACGA AGCTCACAAC TGACCTTCCG ACGACGCCTG TTCATTGCGC GCATGTTGCT GCGCGGTCCG ACATCGACTG AGGACCTGAT TACAGCCGTG CAGCAGGAAC TCGGCGCCGA AGGGTATCCG ACCGCAGCCG TAGCGGCGCT CAAGCACGAT TTGGACGCAC TGAAGTCTTC CTACGGATGT CGGATTACGT ATCGTCGCGA CTCGGGTGGT TATGTCCTGG AAGATTTGGG GACGCTTGCA CTTCTGAAAG GGTCTGAGAC GGTGCGCGAG ACAATGCGAT TGCTCGAAGA ACGGTTCCCT GCCGACTCGA CCGACCCTGG CGCCGTCCAT GTGCATGCGC TGCTGCATCA CCTCCGGTTG CTGGCGGCAG TTGAGCACTA A
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Protein sequence | MTQRRGGIKR SSQLTFRRRL FIARMLLRGP TSTEDLITAV QQELGAEGYP TAAVAALKHD LDALKSSYGC RITYRRDSGG YVLEDLGTLA LLKGSETVRE TMRLLEERFP ADSTDPGAVH VHALLHHLRL LAAVEH
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