Gene Rcas_2643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2643 
Symbol 
ID5540125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3406755 
End bp3407165 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content59% 
IMG OID640894766 
Producthypothetical protein 
Protein accessionYP_001432733 
Protein GI156742604 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0187479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAC GACGCGGCGG CATCAAACGA AGCTCACAAC TGACCTTCCG ACGACGCCTG 
TTCATTGCGC GCATGTTGCT GCGCGGTCCG ACATCGACTG AGGACCTGAT TACAGCCGTG
CAGCAGGAAC TCGGCGCCGA AGGGTATCCG ACCGCAGCCG TAGCGGCGCT CAAGCACGAT
TTGGACGCAC TGAAGTCTTC CTACGGATGT CGGATTACGT ATCGTCGCGA CTCGGGTGGT
TATGTCCTGG AAGATTTGGG GACGCTTGCA CTTCTGAAAG GGTCTGAGAC GGTGCGCGAG
ACAATGCGAT TGCTCGAAGA ACGGTTCCCT GCCGACTCGA CCGACCCTGG CGCCGTCCAT
GTGCATGCGC TGCTGCATCA CCTCCGGTTG CTGGCGGCAG TTGAGCACTA A
 
Protein sequence
MTQRRGGIKR SSQLTFRRRL FIARMLLRGP TSTEDLITAV QQELGAEGYP TAAVAALKHD 
LDALKSSYGC RITYRRDSGG YVLEDLGTLA LLKGSETVRE TMRLLEERFP ADSTDPGAVH
VHALLHHLRL LAAVEH