| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2639 |
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| Symbol | |
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| ID | 5540121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3400646 |
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| End bp | 3402571 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640894763 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001432730 |
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| Protein GI | 156742601 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATG TGACCACAAC CGGATGGCAA CCGGCGTTGC CCTACACACT GCCACTCGTG
ATCAGCGCAT CACTGGCAGT TATCGTCGCC ATGTTTGTCT GGCAGCGCCG CACTGTGCCC
GGCGCGCGAC CACTGATTGT CTTGAGCATC GCGGCTGCGG TGTGGTCGTT TGCCTATGCG
ATGGAAATCG CCGCAACCCC CGCGCCGATT GCACTCTTTT GGGCGCGTGT GCAATATCTG
GGGATTATGA CATTGCCGGT TGCCTGGATT GCCTTCACGC TGGAATATGC CGGTCTGAAA
CCCTGGCTAA CCAGGCGAAC CATGGCGGAG ATCCTCATCG TTCCCGCACT GACACAGATT
GCCGTCTGGA CGAACGATGA CCATGGTCTG ATCTGGCCCC AGATTCGGTT GAACACCGAA
GGACCCTTTC CAATCCTCGA TTTTGATCAC GGACCGGCGT TTTGGGTCTG CAATATCTAT
GCCCATATCT GCCTGGCGAG CGGGACATTG ATCCTGCTCT GGCGATTTGT GCGGTCGCAG
CAGCTCTATC TGAGCCAGAT TGTCGTCTTC CTGATCGGGG CGCTTGCGCC CTGGATTGGA
AACGGATTAT ATGTGCTGAA CCTTACGCCG TGGACCGGGC TGGATCTGTC GCCGTTTGGG
TTCACCTTCA CCGCCGGCGC AATTGCTTTT GGCGCCGTGC GATTGCGGTT CCTTGATGTT
GTGCCCATTG CGCGCGATAT TGTGCTCGAA AGCATGAGCC AGAGCGTCAT CGTGCTCGAT
GATGACAACC GGATTGTCGA TATCAATCGC GCGGCTCAAC ACGTCATCGG CTGCACCGCC
GCCGAGGTGA TCGGCAAACC GATCCGTCAG GCTCTGAGTC GCTGGCCACA GGTTCTTGAT
CGCTACTACA ATATTGTTGA ACTGAACGAA GAGGTGCAAC TCGAAATCGA AGGGCGCCCG
CTTGTGCTGG ACGTTCTCAT CTCGCCGCTG CGTGATCGGA ATGGTCGACT CAGGGGACGA
TTGATTGTCT GGCATGATAT TACTCGCCTC AAACAGATCG AAGAGGTACT GCGTCAGCGG
AACGACGAAC TGACCGCGCT CCAGCAAACA CTGATGGTCG CCAGAGATCA GGCTGAAGCC
GCTCATCGCG CCAAGAGCGC TTTTCTGGCG CATATGAGCC ATGAAGTGCG CACGCCGCTC
AGCGCCATCC TGGGTTATAC CGATCTGATA CGCCTTGATC TGACACGCCG GGGGCAGTCC
GTATATCAGG AGGAGCTGGA GGCCATCCAC GCCTCGGCGC AGCATCTCCT GACAATGATC
AACAACATTC TGGATCTCTC GAAGATCGAC GCGGGAAGAA TGCCCTTGTA TATTGAACTC
TTTTCTATCG AAGCACTGGT TCACAATGTG ACACAGACCG CGCGCCCTCT CGCCGCGCGA
AACGGGAATA GTCTGACGGT CATCCGCGCG CCCGACGCCG ATCTTATGAC GAGCGACAAG
ACGAAGATTC GACAGGTGCT GTTGAATCTT TTGAGCAATG CCGCAAAATT CACCGAAAAC
GGCGCTATCA GCCTCCGTAT CTGGCGTGAA TTGTCTCTTT CGCCTGCGAT GAAAGCAATC
GACGACGGCG CCGACTGGAT CGTGTTTGAG ATTGCCGACA CTGGCATCGG CATTGCACCT
GAACATCTGC CGTTGCTGTT TCAGGATTTT TCGCGGATCG AAGATGCCGA CCACCAGCGG
TATGGCGGCA CCGGACTGGG TCTGGCGATC AGTCGGCAAT TCTGCCGGTT GATGGGAGGC
GATATCACAG TAGCCAGCGC ACCCGGGAAA GGCACGACGT TTACCGTCCG GCTACCGGCA
ACGATCCGGT CGGAGGGGTC CGACAACGAT GCCGTCGTGT CCGACCCTGC ACAGGTGGAG
CGATGA
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| Protein sequence | MADVTTTGWQ PALPYTLPLV ISASLAVIVA MFVWQRRTVP GARPLIVLSI AAAVWSFAYA
MEIAATPAPI ALFWARVQYL GIMTLPVAWI AFTLEYAGLK PWLTRRTMAE ILIVPALTQI
AVWTNDDHGL IWPQIRLNTE GPFPILDFDH GPAFWVCNIY AHICLASGTL ILLWRFVRSQ
QLYLSQIVVF LIGALAPWIG NGLYVLNLTP WTGLDLSPFG FTFTAGAIAF GAVRLRFLDV
VPIARDIVLE SMSQSVIVLD DDNRIVDINR AAQHVIGCTA AEVIGKPIRQ ALSRWPQVLD
RYYNIVELNE EVQLEIEGRP LVLDVLISPL RDRNGRLRGR LIVWHDITRL KQIEEVLRQR
NDELTALQQT LMVARDQAEA AHRAKSAFLA HMSHEVRTPL SAILGYTDLI RLDLTRRGQS
VYQEELEAIH ASAQHLLTMI NNILDLSKID AGRMPLYIEL FSIEALVHNV TQTARPLAAR
NGNSLTVIRA PDADLMTSDK TKIRQVLLNL LSNAAKFTEN GAISLRIWRE LSLSPAMKAI
DDGADWIVFE IADTGIGIAP EHLPLLFQDF SRIEDADHQR YGGTGLGLAI SRQFCRLMGG
DITVASAPGK GTTFTVRLPA TIRSEGSDND AVVSDPAQVE R
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