| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2615 |
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| Symbol | |
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| ID | 5540097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3374519 |
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| End bp | 3375517 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894739 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_001432706 |
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| Protein GI | 156742577 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACGAC CAGTCACTCT TTTCACGGGC CAGTGGGCGG ATCTGCCGCT GGCAACGCTA
GCCGCCAAAG CCAAAAGTTT CGGCTACGAC GGATTGGAGC TCGCCTGCTG GGGCGACCAT
TTTGAAGTCG ATAAAGCGCT CGAATCCGAC CGCTATATCC GCGAAAAGCG CGAACTGCTC
GAACAGCACG GCTTGCAGTG CTTCGCCATC AGCAACCACC TGGTCGGTCA GTGCGTGTGC
GACAACATCG ACGAACGCCA CAAAGCGATC ATCCCGGCGC GCATCTGGGG GGACGGTGAT
CCCGAAGGGG TGCGCCAGCG CGCCGCCGAA GAGATGAAGA ACACCGCTCG CGCCGCCGCT
GCGTTCGGCG TCAAGCAGGT CAACGGTTTC ACCGGGTCGT CGATCTGGCA CTTGATCTAT
TCCTTCCCGC CCAACATTCC CGCACAGGTC GAGGCGGGGT ACGCCGATTT CGCCGCACGC
TGGAATCCGA TTATGGACGT ATTCGATGAG GTGGGGGTGC GCTTCGGCTT GGAAGTGCAT
CCGACCGAGA TCGCCTACGA TATTGTGACA ACCGAGAAAA CCCTGGCGGC GATTGGGCGC
CGACCGGCAT TCGGCATCAA CTTCGATCCT AGCCATCTGA TCCATCAGTT TGTCGATCCG
GTGCTGTTCA TCGAAACATT TGCCGACCGT ATCTACCATG TGCATGTGAA GGAGAGCCGC
CGCAACCTGA ACGGGCGCAC GAGCATTCTG GCGTCGCACC TCAACTTCGG CGACCCGCGT
CGCGGCTGGG ATTTCGTGTC GCCAGGGCAC GGCGATATTC AGTGGGACCC GATCTTCCGT
GCGCTGACCC GCATCGGCTA TAACGGTCCC TTGTCGGTCG AGTGGGAAGA CAGCGGCATG
GACCGCGAGT TCGGCGCGGC GGAAGCGTGC GCATTGGTGA AGAAGAGCGA CTTCCCTCCC
AGCGCAGTCG CCTTCGATGC CGCATTCCAA AAATCGTGA
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| Protein sequence | MPRPVTLFTG QWADLPLATL AAKAKSFGYD GLELACWGDH FEVDKALESD RYIREKRELL
EQHGLQCFAI SNHLVGQCVC DNIDERHKAI IPARIWGDGD PEGVRQRAAE EMKNTARAAA
AFGVKQVNGF TGSSIWHLIY SFPPNIPAQV EAGYADFAAR WNPIMDVFDE VGVRFGLEVH
PTEIAYDIVT TEKTLAAIGR RPAFGINFDP SHLIHQFVDP VLFIETFADR IYHVHVKESR
RNLNGRTSIL ASHLNFGDPR RGWDFVSPGH GDIQWDPIFR ALTRIGYNGP LSVEWEDSGM
DREFGAAEAC ALVKKSDFPP SAVAFDAAFQ KS
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