| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2611 |
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| Symbol | |
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| ID | 5540093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3370641 |
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| End bp | 3371843 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640894735 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001432702 |
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| Protein GI | 156742573 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGACG AGACGCCGTG CAGCATCGCG TCGTCGGCTG CACCAACCCC TATCGCCGAC
CTGACGATGG CGCATCTGGT GATTGTCACG GGCGGTCGCC TGGCGCTGGT GGCGGCATTC
CGCATTATCT ACCCGCTGCA ACCATTCCTG ACCGGTGAGT TGAACGTTGA TCTGCGCGCC
GTCAGCGCCC TGATCACGGT GCAACTGGCC GCGTCGATGC TCAGTCCGAT CGGCGGGGCG
CTGGCGGATA CTCGCGGTGA GCGCGCAACA ATGAGCGGCG GGCTGGCAAT CTTTGTGCTG
GGGACGGCGC TGTGCGCGCT TTCCCCTTCA TTTACCACCT TCTTGATCGG CTATACCCTG
GTGGGGCTGG CAATCGCGCT CTATCAACCG GCGGCGCAGG CGTACCTGTC GGCGCGCACG
CCGTATGCGC GGCGGGGGTG GGCATTGGGG GTATTCGAGA CCTCATGGGC GTTGGGGGCA
TTGCTGGGGG TTGCACCCCT GATGCAGATC GTTCAGACGA CACAGCAATC GATGCCAGCG
TTCTGGGTGT TGTCCGCTGC CGGGTTGGCA TCGCTGGCGC TGGTGTGGAC ATTGCTGCCG
GACGGATCGC GCAATCTTCG AGCAACGGCG CACCGGATCG ACTGGCGGGC GCTGCGCGCG
CCAGGTCCAC TCCTGGCGCT GCTGTTCGTG GCATCGACTC TCTGTGCGTA TGACCTGATC
CAGATCGTGC AGGCGCCCTG GCTGCGTGAA ACCCTTGCGG TGAATGAGGC GCAACTGGGG
CAACTGGTCG CGCTGGCAGG AATTGGCGAA CTGATCGGCG CGATGGGAGT CGCACTCCTG
GGTGACCGAT TGGGCATTCG GCGCACGACT GCCGCCGGAT TTCTCCTGGC GGCGATGTGC
GTGGCGGCGT TACCATTTGT CGGGCGGGAG TGGACGTGGT TGCTGCCGGT CTATCTGCTG
CTGTATCTCT CCTTTGAGTA TGCAATTGTG GCAGCGTTCC CGCTGATCTC GGCGGTGGCG
CCGACAGCGC GCGGGACCAT GCTGGCGCTC AGCGCTGCTG CCATCGGCGC CGGAAGGGTT
GCCGCCTCAC TGGTCGCCAC GTCACTCTGG CTGACGTTGG GGATCGGTTG GACGGCGATG
ATCACAGCGA CGATCCTCTG TGGATCGCTT CTCTGCCTGC TGGCGGTGAA ACCGAGGGAG
TAA
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| Protein sequence | MPDETPCSIA SSAAPTPIAD LTMAHLVIVT GGRLALVAAF RIIYPLQPFL TGELNVDLRA
VSALITVQLA ASMLSPIGGA LADTRGERAT MSGGLAIFVL GTALCALSPS FTTFLIGYTL
VGLAIALYQP AAQAYLSART PYARRGWALG VFETSWALGA LLGVAPLMQI VQTTQQSMPA
FWVLSAAGLA SLALVWTLLP DGSRNLRATA HRIDWRALRA PGPLLALLFV ASTLCAYDLI
QIVQAPWLRE TLAVNEAQLG QLVALAGIGE LIGAMGVALL GDRLGIRRTT AAGFLLAAMC
VAALPFVGRE WTWLLPVYLL LYLSFEYAIV AAFPLISAVA PTARGTMLAL SAAAIGAGRV
AASLVATSLW LTLGIGWTAM ITATILCGSL LCLLAVKPRE
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