| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2599 |
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| Symbol | |
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| ID | 5540081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3352007 |
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| End bp | 3352705 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640894726 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001432693 |
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| Protein GI | 156742564 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.268704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGAGTAC TGATTGTTGA AGATGAACGT GCCATCGCCG GTTATATCAA ACGAGGTCTT
GAAGAGCAAG GTTATGCCGT CGATGTCGCT TATGATGGTC GGGAAGCGCT TGACTGGCTG
GATGCGGCGC CGTTTGATCT GGTGATCCTC GATTTGATGC TGCCTCAGAT CGATGGTCTC
ACCGTCTGTC GTGAATTGCG CGCTCGTGGT TTTCGTATGC CCGTGCTGAT GCTAACAGCC
CGCGATTCGA TTGACGACCG CGTGCGTGGT CTTGACAGTG GCGCTGATGA TTATCTGGTC
AAACCGTTCG CGATCCAAGA GTTGTTAGCT CGTCTACGCG CGCTTGCGCG GCGGAGTACC
GATGCGCCGA AAACGCCGGT GCTGCACATT GCCGATCTGA TGCTTGATAC TGCTACCCGT
CGTGTCAGTC GTGGCGGAAA GTACATTGAA TTGACCGCTA AAGAGTATGC CATACTTGAG
TGTTTAATGC GAGCATCAGG CCGACTCCTG ACGCGGACAA TGATTGCCGA ACACGTCTGG
AACTACGACA CATTTAATCA ATCGAATGTC ATCGATGTCT ATATTCGTAA TCTGCGTCGC
AAAATTGACG ATCCCTTCCC GGTGAAACTC ATTCAGACGG TACGGGGGGC CGGATATCGG
TTATGGTACG AAGCCGAGCA CGAGCATGAT CCAACGTAG
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| Protein sequence | MRVLIVEDER AIAGYIKRGL EEQGYAVDVA YDGREALDWL DAAPFDLVIL DLMLPQIDGL
TVCRELRARG FRMPVLMLTA RDSIDDRVRG LDSGADDYLV KPFAIQELLA RLRALARRST
DAPKTPVLHI ADLMLDTATR RVSRGGKYIE LTAKEYAILE CLMRASGRLL TRTMIAEHVW
NYDTFNQSNV IDVYIRNLRR KIDDPFPVKL IQTVRGAGYR LWYEAEHEHD PT
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