Gene Rcas_2594 details

Gene Information

• Locus tag: Rcas_2594
• ID: 5540076
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Roseiflexus castenholzii DSM 13941
• Kingdom: Bacteria
• Replicon accession: NC_009767
• Strand: +
• Start bp: 3348173
• End bp: 3348736
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 640894721
• Product: peptidase
• Protein accession: YP_001432688
• Protein GI: 156742559

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 30
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAACGAT GGATACGTAT CTTCGCTCCG ATGGTCGCGC TGGCGTTGGT GGTGGTGGCT 
GCGATTGCCG CGTTGGGCAA TACCAATGTG CAAGCGCGAC GTGCCGATCC GGTATCGGCT 
GTAGTCGTAG CTCAGGCACA GCCGCAAGCG CCGACAGTGA CCGTTGAGCC GGATGAGGGT 
AGCGAGACGC CCGACGCTCA GGAAGGGCCG GAGACGCCCG ACGCTCAGGA AGGGCCGGAG 
ACGCCCGATG CCCAGGAAGG GCCGGAGACG CCCGACGCTG ATGAATCGGC TGAGGCGGCT 
GCCTTAGCGA GCAAAGTCGC GATTAGCGAG CAACAGGCGG TTGCCACAGC ATTGGCTGCT 
AATCCCGGCG CCACGATGGT CAAGGTCTCG TTGGACAATG AAAACGGGGT GATCGTCTAC 
AGTGTTGCGT TAGACAACGG CGCCGATGTG AAAGTTGATG CGATTACCGG ACAGATCACC 
TCTGTTGATC AGGCGGGTGC AGAGGAAGAA GGGAACGATG TCGAGCATGT TGATGAAACG 
CCCACCATTT CCGTTCAGCC ATAA 

 

Protein sequence

MKRWIRIFAP MVALALVVVA AIAALGNTNV QARRADPVSA VVVAQAQPQA PTVTVEPDEG 
SETPDAQEGP ETPDAQEGPE TPDAQEGPET PDADESAEAA ALASKVAISE QQAVATALAA 
NPGATMVKVS LDNENGVIVY SVALDNGADV KVDAITGQIT SVDQAGAEEE GNDVEHVDET 
PTISVQP