| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2571 |
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| Symbol | |
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| ID | 5540053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3309694 |
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| End bp | 3310296 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640894700 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001432667 |
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| Protein GI | 156742538 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCGGAC CAACCATCGA ACTCACGATC TACGAGAATG AAGAGGCGTT GCTCGCCGGG
CTGCGTCGCC GTGACCCCGA TTCGTGCGCC TGTTTGATCA AACGATTTGC GCCGTTGGTC
TATGCTCAAG CGATACGACT ACTCGGCGAT GCGGATGAGG CGGAGGGCAT TCTGCAACAA
ACATTCATTA AGGCGTGCGA TAAACTCGAC ACCTACGAAG GGCGCAGTGG GCTGGGCAGC
TGGCTCTATC GCATTGCAAC GAATGAAGCG CTCATGCACC TGCGTCAGCG GTCGCCGCAC
GTCAATCTTG CCGACGTCGC CGAGACGATC CAGGAAGATG AAATGCCGCA CCGTCTGACA
TCATGGACGT TCGATCCGGC AGCTGCGGCG CTGAACAGCG AACTGCGCAT GGTGCTGGAA
CAGGCGCTGG CAACGCTTCC TGAAGCGCTG CGTGTTGTCT TTGTGTTGCG CGATATTCAG
GGATTGAGCA CTGAGGAGAC CGCAGCAGCG CTTGGTCTGG GTGAAAGCGC CGTCAAGGTG
CGGTTGCACC GCGCGCGGCT GCGGCTGCGG GAATTGCTCT CTGCATACAT GCAGGAACAT
TGA
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| Protein sequence | MPGPTIELTI YENEEALLAG LRRRDPDSCA CLIKRFAPLV YAQAIRLLGD ADEAEGILQQ
TFIKACDKLD TYEGRSGLGS WLYRIATNEA LMHLRQRSPH VNLADVAETI QEDEMPHRLT
SWTFDPAAAA LNSELRMVLE QALATLPEAL RVVFVLRDIQ GLSTEETAAA LGLGESAVKV
RLHRARLRLR ELLSAYMQEH
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