| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2569 |
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| Symbol | |
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| ID | 5540051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3308790 |
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| End bp | 3309371 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894698 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001432665 |
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| Protein GI | 156742536 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATG AGGCAACCCT GATCAACAGG CTGCGCCAGC GTGACCCGCA GGCGTTTGCC
ACATTCTTTG AGACCTATGC CGACCGCGTC TACCGCCTGG CATACGGTAT TGTCGGCAGT
GAAACCGATG CCGAGGAGGT GGTGCAGGCG ACATTCATTT CGGCGCTCGA AGCCATTGAG
CGCTTTGAAC ATCATGCGCG TCTTGGCACC TGGCTCTATC GCATTGCCTA TAATCACGCG
CTCATGATCC TGCGCCGACG GCGACCTGAA GAGACGCTGC CAGATGATGA CGGCGCGCTG
CCGCTTCCAT CGGCTCTGAA AGACTGGAGC GTGTTGCCGG AGGAGCGCCT GCTCAGCCGC
GAGGCGCAGG AAATGCTGCG GAAAGCGATC ATGGAACTGC CAACGACTCT GCGCGCAGCA
TTCATCTGTC GTGACATTGA AGGTCTTTCA ACGGCTGACT GCGCACAGAT CATCGGCATT
AGCGAGGGGG CGTTGAAGGT GCGCCTCCAT CGCGCGCGCC TGACGCTGCG TGAGCGGGTC
AGTGAGTACT TCGGCGAGTG GGTGGCGCCG GGAAACGGCT GA
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| Protein sequence | MDDEATLINR LRQRDPQAFA TFFETYADRV YRLAYGIVGS ETDAEEVVQA TFISALEAIE
RFEHHARLGT WLYRIAYNHA LMILRRRRPE ETLPDDDGAL PLPSALKDWS VLPEERLLSR
EAQEMLRKAI MELPTTLRAA FICRDIEGLS TADCAQIIGI SEGALKVRLH RARLTLRERV
SEYFGEWVAP GNG
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