| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2565 |
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| Symbol | |
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| ID | 5540047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3305389 |
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| End bp | 3306435 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894694 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_001432661 |
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| Protein GI | 156742532 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.472024 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAACCGG TCGATAACCT TCACGTTCTT GCTTTTGAGC CGCTCACCCC GCCACGCGCC
CTGCGTGAGC GGTATCCGAT CACCGAAGCC GCAGCGCAGA CGGTCTACGA AACGCGGGAA
TCGATCAAGC GCATTGTGCG CCGTGAAGAC CAGCGCCTGC TGGCGGTTGT CGGTCCCTGT
TCGATCCACG ACACCGGAGC GGCGCTGGAG TATGCCGGGC GACTGGCGCG CCTGGCAGGC
GAGATGCGCG ACCGAATCGT GATTGTGATG CGCGCCTACT TCGAGAAACC GCGCACCACC
GTCGGATGGC GCGGTCTGAT CAACGATCCG CACCTCGACG GTTCGTTCGA CATGAACGAA
GGATTACGGC GCGCGCGCGA GTTGTTGTTG CGCATCAACG ACATTGGGCT GCCAACCGCC
ACCGAAATGC TCGACCCGAT CAGCCCGCAG TATATTACTG ACCTGATCAG CCTGACTGCC
ATCGGCGCGC GCACCGTCGA GTCGCAGACC CATCGCGCTC TCGCCAGCGG TCTCTCGATG
CCGGTTGGCT ACAAGAACAG CACCGATGGC AATGTGCAGG TGGCAGTTAA TGCATTTCTA
TCGGCGCGCC GGGCGCACTC CTTCCTTGGC ATCGATCAGG ATGGACAGAG TTGCGTGGTG
CGTACCACCG GCAATCCCGA TGGCATGATC ATCCTGCGCG GTAGCAGCGC CGGACCGAAC
TATGATGCGG CAACCGTTGT GCGCACTGAA CAGGCGATGG AGGCGGCAGG TCTATTGCCC
GCCATCATGA TCGATTGTAG CCACGCCAAT GCGGGCGGCG ATCACACGCG CCAGCCGCAC
GTCTGGCGCG AGGTGCTACG CGACCACATC GCCAGCCGCA ACGCCGTCAT CGGTATGATG
GTCGAAAGCT ATCTGTACGA AGGGAAGCAA CCGATCCTTG CCGATCGCTC ACGGCTGCGC
TACGGCGTGT CGGTGACCGA TGCGTGTGTT GGTTGGGAAA CGACCGAGCG TATGCTGATC
GAGGCATATG AGGCGCTGAA AGGTTGA
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| Protein sequence | MQPVDNLHVL AFEPLTPPRA LRERYPITEA AAQTVYETRE SIKRIVRRED QRLLAVVGPC
SIHDTGAALE YAGRLARLAG EMRDRIVIVM RAYFEKPRTT VGWRGLINDP HLDGSFDMNE
GLRRARELLL RINDIGLPTA TEMLDPISPQ YITDLISLTA IGARTVESQT HRALASGLSM
PVGYKNSTDG NVQVAVNAFL SARRAHSFLG IDQDGQSCVV RTTGNPDGMI ILRGSSAGPN
YDAATVVRTE QAMEAAGLLP AIMIDCSHAN AGGDHTRQPH VWREVLRDHI ASRNAVIGMM
VESYLYEGKQ PILADRSRLR YGVSVTDACV GWETTERMLI EAYEALKG
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