| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2561 |
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| Symbol | rplS |
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| ID | 5540043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3302911 |
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| End bp | 3303261 |
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| Gene Length | 351 bp |
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| Protein Length | 116 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640894690 |
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| Product | 50S ribosomal protein L19 |
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| Protein accession | YP_001432657 |
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| Protein GI | 156742528 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0335] Ribosomal protein L19 |
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| TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000880835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCACAGC AGATTATAGA AGAAATCGAG CGTCGCTACA TGAAGCAGGA TGTCCCCGAG
TTCCGCGTTG GCGACACGGT ACGCGTCGGT GTGCGCGTTG TCGAGGGGAA CCGTGAGCGC
GTCCAGGAAT TCGAGGGGGT CGTCATCCGC AAGCGGGGCA GCGGTCTCAA CGAGAACTTT
ACCGTGCGGC GCATCGCATC GCACGGGATC GGCGTCGAGC GCACATTTCT TGTCCACGCG
CCGCGCGTTG AGAGCATCCA GGTTGTCCGC CGCGGTAAGG TGCGCCGCGC GCGCCTGTTC
TACCTGCGCG GTCTCACCGG CAAAGCGGCG CGGATCAAAG AGCGGCGCTG A
|
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| Protein sequence | MSQQIIEEIE RRYMKQDVPE FRVGDTVRVG VRVVEGNRER VQEFEGVVIR KRGSGLNENF
TVRRIASHGI GVERTFLVHA PRVESIQVVR RGKVRRARLF YLRGLTGKAA RIKERR
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