| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2557 |
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| Symbol | |
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| ID | 5540039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3298669 |
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| End bp | 3301077 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894686 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_001432653 |
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| Protein GI | 156742524 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0122618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTC CACTCCCAAC CCAGGACCCG CCCGACATCC CGGAAGTGCT ACCGATCCTG
CCGCTCAACA ACGTCGTGCT CTTCCCCGGC ATGTTCCTGC CGCTCGTCGT CAGCGGCGAC
ACATGGGTGA AACTGGTCGA TGAAGCAGCG CTTGCAACGA AGATGGTCGG CGTGTTTATG
CGCACTCAAC CCGGCGAGGG GTTCGATCCG CTGGCGCTGG CGCGCACCGG CGCCGTCGCG
TTAATCGTCC GCATGCTGCG GTTGCCGCAC GGCGCAGTGC AAATCCTGGT GCAGGGGCAG
GCGCGCATTC AGATCAGGCA ACTGATCGTC ACCGAACCAT ATCCGCAGGC GCGCGTCGCC
ATTCATCGCG ATCCCGCTGT GCTTTCGGTC GAGGTCAGCG GTCTGGCGCG CGCGGCGCTC
GCCGCCTTCC AGCAGATCAT CCAACTCAGC CCGACTCTGC CTGATGAACT GGCAATCGTT
GCGGCCAATA CCGCGCAACC CGGTATGCTG GCAGACCTGA TCGCAGCGAA TCTGAACCTT
AAACCAGAGG ATCAGCAACT TGTGCTCGAT ACGCTCGATG TGCAAGAACG CCTGCGTCAG
GTGCTCAGTT TCCTCGAGCG CGAACGTGAA ATTCTGACAA TTGGACGCAA GGCGCAGGAA
GAGATGTCGA AAAGCCAGCG CGAGTATGTG CTGCGCCAGC AACTCGAGGC GATCAAACGC
GAGTTGGGCG AAACCGACGA TCATGCCGCC GAAATTGCAG AGTTGCGTCG TCGGCTCGAG
GCAGCGAACC TTCCCGAAGA GGCGCGCAAA GAAGCCGAAC GCGAGATTTC GCGCCTGGAG
CGCATGCCCC CCGGCGCCGC CGAGTATGTC GTTGCCCGCA CCTACCTGGA CTGGCTCCTC
GATCTGCCGT GGAATGTCAG TACGGAAGAC AACCTCGATC TGACGCAGGC GCGTCAGGTG
CTCGATGAGG ATCACTACGA TCTGGAACGG ATCAAAGAGC GTATTATCGA GTACCTGGCG
GTGCGCAAAC TGCGGTTGGA GCAAGACGCC AGCGGCAGTG CGCGCGGTCC GATCCTCTGT
TTTGTCGGTC CTCCCGGCGT TGGGAAGACC AGTCTGGGAA CCTCGATTGC GCGTGCGCTG
GGGCGCAAGT TCGTGCGGGT GGCGCTCGGC GGCGTGCGCG ATGAGGCGGA GATTCGTGGG
CATCGCCGCA CCTATATCGG CGCGCTGCCA GGGCGCATCA TCCAGGGAAT TAATCGCGCC
GGCAGCAACA ATCCGGTCTT CATGCTCGAT GAGGTCGATA AATTGAGCGT CGGCTTCCAG
GGCGATCCGG CGGCTGCGTT GCTGGAAGTG CTCGACCCGG AACAGAATGT GGCGTTTGTC
GACCGCTACC TCGATGTGCC GTTCGATCTG AGTCGTGCGC TCTTCATCTG CACCGCCAAC
CGCTCCGATA CCATTCCGCC CGCGCTGCTC GACCGCATGG AACTACTGGA ACTCGCTGGC
TACACTGAGA TGGAAAAACT CGAGATTTGT CGCCGCTACC TGATCCAGCG CCAGCGGAAC
GAGCAAGGTC TGGCGGAACG CGCACCGACG ATCACCGAAG CGGCGCTTCG CCGCCTGATC
CGCGAATACA CCCACGAGGC GGGTGTGCGC GATTTGGAGC GACGGATCGG CGCGATTTAC
CGCAAGATGG CAACGCGCGC GGCGGAGGGA CAACCACTTC CGGATCAGGT GGATGCGCCC
GATCTCGATG ACTTGCTCGG ACCGCCGCGC TTCCGCAGTG AAACGCTCCT CGGTGAAGAT
GAGGTGGGCG TGGTCACCGG GCTGGCATGG ACGCCGACCG GCGGCGACGT GCTCTTTGTC
GAAGCGAGTG TTGTGCCGGG CAACGGTCAG TTGACGCTGA CCGGTCAACT TGGTGATGTG
ATGAAGGAAT CGGCGCGCGC AGCGCTGACG TATGCGCGGT CGCGGGCGCG GGCGTTGAAC
ATTCCGACCG ATTTTGCGCA GATTTGCGAT ATTCATATCC ATGTTCCGGC CGGCGCTGTT
CCCAAAGATG GACCATCCGC CGGCATCACG ATGGCAAGCG CGCTTATCTC AGCACTGACC
GACCGCCGTG CCTACAAACA CGTCGCCATG ACCGGCGAAA TCACGCTGCG CGGCAAGGTG
CTGCCCATTG GCGGGGTGAA GGAAAAGGTG CTGGCGGCGC AGCGCGCCGG TGTGCGCACG
GTTCTGCTGC CGAAGGCGAA TGCGCCCGAT CTGCGCGAAC TGCCGGAAGA AACGCGCCAG
CAAATCGACA TTGTTTTGGT CGAACACATG GATGAGGTAC TGCCGCGCGT CCTGCATCCC
AAGAGCGAGT CGGTCACCTT GGCTGAACCG GCGCCACCCG ATGGGGCGGG AACGGTGCAG
GCGACGTAA
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| Protein sequence | MSTPLPTQDP PDIPEVLPIL PLNNVVLFPG MFLPLVVSGD TWVKLVDEAA LATKMVGVFM
RTQPGEGFDP LALARTGAVA LIVRMLRLPH GAVQILVQGQ ARIQIRQLIV TEPYPQARVA
IHRDPAVLSV EVSGLARAAL AAFQQIIQLS PTLPDELAIV AANTAQPGML ADLIAANLNL
KPEDQQLVLD TLDVQERLRQ VLSFLERERE ILTIGRKAQE EMSKSQREYV LRQQLEAIKR
ELGETDDHAA EIAELRRRLE AANLPEEARK EAEREISRLE RMPPGAAEYV VARTYLDWLL
DLPWNVSTED NLDLTQARQV LDEDHYDLER IKERIIEYLA VRKLRLEQDA SGSARGPILC
FVGPPGVGKT SLGTSIARAL GRKFVRVALG GVRDEAEIRG HRRTYIGALP GRIIQGINRA
GSNNPVFMLD EVDKLSVGFQ GDPAAALLEV LDPEQNVAFV DRYLDVPFDL SRALFICTAN
RSDTIPPALL DRMELLELAG YTEMEKLEIC RRYLIQRQRN EQGLAERAPT ITEAALRRLI
REYTHEAGVR DLERRIGAIY RKMATRAAEG QPLPDQVDAP DLDDLLGPPR FRSETLLGED
EVGVVTGLAW TPTGGDVLFV EASVVPGNGQ LTLTGQLGDV MKESARAALT YARSRARALN
IPTDFAQICD IHIHVPAGAV PKDGPSAGIT MASALISALT DRRAYKHVAM TGEITLRGKV
LPIGGVKEKV LAAQRAGVRT VLLPKANAPD LRELPEETRQ QIDIVLVEHM DEVLPRVLHP
KSESVTLAEP APPDGAGTVQ AT
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