| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2554 |
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| Symbol | |
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| ID | 5540036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3294633 |
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| End bp | 3296069 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640894683 |
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| Product | Alpha-L-fucosidase |
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| Protein accession | YP_001432650 |
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| Protein GI | 156742521 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3669] Alpha-L-fucosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0869924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.838653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTACG AACCAACGCT CGAATCTGTC CGCGCGCACA TCGTTCCCGA CTGGTTTCAC
GATGCGAAAC TGGGGATTTT CATTCACTGG GGTCTCTACT CCGTCCCCGG ATGGGCGCCG
ACGACAGGAC CGCTCCACGA TGTCGTGGCG AAAGAAGGCT GGAAAGAATG GTTCAGGCGC
AATCCATACG CCGAGTGGTA CATGAACTCA TTGCGCATTC CCGGCAGCCC GACCGTCGAT
TACCACGCGC AGCATTTTGG CGCCGATTTT CCATACGAAC GTTTCGCCGA GACGTTCAAC
CGTGAGACGG CAGCGTGGGA CCCGGCAGTC TGGGCGGATC TGTTCAAGCG CGCCGGAGCG
CAGTACGTTG TGCTGACCAC CAAGCACCAC GACGGTTTCT TGCTCTGGCC CAGCGCGCGC
CCCAATCCGT TCCGCGCAGG GTACCACGCC ACACGCGACC TGGTTGGCGA TCTGACCAGC
GCCGTGCGTG CCGCAGGGCT GCGCATGGGT CTCTATTACT CCGGCGGTCT CGATTGGACG
TTCAATGACC GGGTGATCGC CGATATTGTT GACCTCTTCA TGGGCGTGCC ACAGCAGTTG
GAGTACGTCG AGTACGCCAA TGCGCACTGG AAGGAATTGA TTGATCGCTA TCAGCCCAGC
ATACTCTGGA ATGACATCGG CTATCCGGCA GCAGCGAACC TGGTGGAGTT GTTTAGTTTC
TACTATAACA CTATTCCCGA AGGGGTCATC AACGACCGCT TCACGCAGGC GTCCATCGGC
GACGGTCCGC CTGATCCGGC AGCGATCATG CAGGCGCTGG CGCAGGGCAT GCTTCCCACA
CCGCCGCACT TCGACTTCCG CACCCCAGAG TATGCGGTGT TCCCCGACAT CAAAGCCGAA
AAGTGGGAGT CGTGCCGTGG TTTGGGATAC TCGTTCGGCT ACAACCGCAA CGAAACGGTT
GACGATATGC TTTCGCCCGT CAAGTTGATC CGATCATTCG TTGACATCGT CAGCAAGAAT
GGCAACCTGC TGATCAATGT CGGTCCGATG GGTGACGGAA CGATTCCGCC GGAGCAGGCG
GAGCGACTCG AAGCGCTCGG CGCGTGGCTC TCGGTCAACG GTGAAGCGAT CTACGGTACG
CGCCCCTGGA CGCGCGCTGA GGGCGTGACC GACAGCGGCA TCGGGATGCG ATTTACGCGC
AAGGGCGACG ATCTGTATGC GATCCTCCTT GATACGCCGC AGCAGCCCAA CGTCACCCTG
CTTGACGTGA CCGTTTCTCC AGGATCGCGT GTGATTCTGA CCGGTTACGG CGAGATTGCA
GCGGCACAGC ACGACCACGG TTTGACCATA ACCTTGCCTG CGTCGCTCGC CGATGCGCCT
GCGCACGCGA TCCGCATTGT TGGCGGTGCA TCGGCTGCGT CGGGAGGCGG AAGGTAA
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| Protein sequence | MMYEPTLESV RAHIVPDWFH DAKLGIFIHW GLYSVPGWAP TTGPLHDVVA KEGWKEWFRR
NPYAEWYMNS LRIPGSPTVD YHAQHFGADF PYERFAETFN RETAAWDPAV WADLFKRAGA
QYVVLTTKHH DGFLLWPSAR PNPFRAGYHA TRDLVGDLTS AVRAAGLRMG LYYSGGLDWT
FNDRVIADIV DLFMGVPQQL EYVEYANAHW KELIDRYQPS ILWNDIGYPA AANLVELFSF
YYNTIPEGVI NDRFTQASIG DGPPDPAAIM QALAQGMLPT PPHFDFRTPE YAVFPDIKAE
KWESCRGLGY SFGYNRNETV DDMLSPVKLI RSFVDIVSKN GNLLINVGPM GDGTIPPEQA
ERLEALGAWL SVNGEAIYGT RPWTRAEGVT DSGIGMRFTR KGDDLYAILL DTPQQPNVTL
LDVTVSPGSR VILTGYGEIA AAQHDHGLTI TLPASLADAP AHAIRIVGGA SAASGGGR
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