| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2553 |
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| Symbol | |
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| ID | 5540035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3293036 |
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| End bp | 3294340 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640894682 |
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| Product | mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_001432649 |
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| Protein GI | 156742520 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00423764 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.461549 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATCA CCATCACCCG CGCCGAAGCG CGCGACGTTC GCTTCCCCAC TTCCCGCACT
CTCGATGGAT CGGACGCCAT GAACCCCGAC CCCGACTACT CGGCGGCATA TGTGATTCTC
CACACAAACG TCCCTGGTCT GACGGGGCAC GGGCTGACCT TTACCATCGG GCGTGGCAAT
GAATTGTGCG TCGCCGCATG TCAGGTTTTG CTGCCGATGG TGGTGAACCG TTCCCTTGAG
TCAATCACTG CTGACATGGG CGCGTTCTGG CATATGATCA CCGGCGACAG CCAGTTGCGC
TGGATCGGAC CGGAGAAGGG CGTGATTCAT CTGGCGACTG CCGCCGTGGT CAATGCGGTT
TGGGACCTGT GGGCAAAGGT TGAGCAAAAA CCGCTCTGGA AGTTGTTGAG CGATATGTCG
CCGGAAGAAC TGGTGCGCTG CATCGATTTT CGCTACATTT CCGATGCGCT GACGCCTGAT
GAGGCGCGTG ACATTCTGCG CCGCCAGGAG GCGACGCGCG CCAAACGCGA GGCGGAAATG
CGCACGCACG GGTTTCCTGC CTATACGACA TCGGCGGGTT GGATCGGGTA TTCCGACGAC
AAAGTGCGCC GGTTGTGCCG GGAAGCGATC GATGCCGGGT TCCAGCACAT CAAAATGAAG
GTTGGACGTG ATCTCGATGC CGACCGGCGC CGCGCCCGGT TGATCCGCGA GATCATTGGA
CCGGATCGCA AATTAATGGC AGATGCCAAC CAGGTGTGGG ATGTGCCGCA GGCGATTGCC
TGGATGCGCG ACCTTGCAGA ATTCGACCTC TGGTGGATCG AGGAGCCAAC CAGCCCCGAC
GATATTCTGG GTCATGCGGC GATTGCCCGC GCTGTGGCGC CGGTTGGCGT GGCAACCGGC
GAGCATGTCC AGAACCGCAT TGTCTTCAAA CAACTGTTGC AGATGAATGC CATCAATTTC
TGTCAGATCG ATGCCTGCCG CCTCGGCGGG GTCAACGAGG TGTTGGCGGT TATCCTGATG
GCCGCAAAGT TTGGCGTACC GGTCTGCCCG CATGCTGGCG GTGTCGGGTT GTGCGAGTAT
GTCCAACATC TGTCGATCTG GGATTACATC TGCGTTTCCG CATCGCTGGA GAATCGTGTG
ATTGAATACG TCGATCATCT GCACGAGCAC TTTCTCGATC CGGTTGTCAT CCGCAATGCT
CGCTACATGC CGCCGCAGAC GCCAGGATAC AGCATCGAAA TGAAACCGGA GTCGCTGGCA
ATGTATGAGT ATCCTCATGG TGCGGCATGG AGCAATCTCG GTTAA
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| Protein sequence | MAITITRAEA RDVRFPTSRT LDGSDAMNPD PDYSAAYVIL HTNVPGLTGH GLTFTIGRGN
ELCVAACQVL LPMVVNRSLE SITADMGAFW HMITGDSQLR WIGPEKGVIH LATAAVVNAV
WDLWAKVEQK PLWKLLSDMS PEELVRCIDF RYISDALTPD EARDILRRQE ATRAKREAEM
RTHGFPAYTT SAGWIGYSDD KVRRLCREAI DAGFQHIKMK VGRDLDADRR RARLIREIIG
PDRKLMADAN QVWDVPQAIA WMRDLAEFDL WWIEEPTSPD DILGHAAIAR AVAPVGVATG
EHVQNRIVFK QLLQMNAINF CQIDACRLGG VNEVLAVILM AAKFGVPVCP HAGGVGLCEY
VQHLSIWDYI CVSASLENRV IEYVDHLHEH FLDPVVIRNA RYMPPQTPGY SIEMKPESLA
MYEYPHGAAW SNLG
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