Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2549 |
Symbol | |
ID | 5540031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3289284 |
End bp | 3289748 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640894679 |
Product | dehydratase |
Protein accession | YP_001432646 |
Protein GI | 156742517 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0407782 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.257026 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCACA AACAGTATTT CGAGGACTAC GCCATCGGCT TTCACCGTCG CACCATGGGG CGCACCATTA CAGAAGCCGA TGTGGTGCTG CACGCCGGGC AGACAGGCGA TTTCTATCCG CACCATATGG ATGCAGAGTG GTGCAAGACG CAGGATTTCG GGCAGCGTAT TGCGCATGGC ACGCTCATTT TCGGCGTCGC CATCGGCATG ACCGCCGGCG CCATCAACCC ACATGCTATG TCGTATGGCT ATGATCGATT GCGGTTCATT CGCCCGGTCT TCATCAACGA TACGATCACC GTCGAGGCGA CCATTACCGA AAAGCGCAAC CATCCGCGCC GCGCTGATCA TGGGATTGTC GTCGAAACGA TCGAGGTGTT CAACCAGCAT CATGAAACGT TGCTGGTGTG TGAACATCTG TATCTGGTGA AGCGACGCCA GACGTCGGTG CTTGCTGAAC ATTGA
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Protein sequence | MTHKQYFEDY AIGFHRRTMG RTITEADVVL HAGQTGDFYP HHMDAEWCKT QDFGQRIAHG TLIFGVAIGM TAGAINPHAM SYGYDRLRFI RPVFINDTIT VEATITEKRN HPRRADHGIV VETIEVFNQH HETLLVCEHL YLVKRRQTSV LAEH
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