Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2540 |
Symbol | |
ID | 5540022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3279012 |
End bp | 3280838 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640894670 |
Product | magnesium chelatase ATPase subunit D |
Protein accession | YP_001432637 |
Protein GI | 156742508 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1239] Mg-chelatase subunit ChlI |
TIGRFAM ID | [TIGR02031] magnesium chelatase ATPase subunit D |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0127651 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCGC TTCCACTCCC TGCACTCGTT GGTCTGGAAC TGGCACAGCA GGCATTGCTC CTGCTGGCGG TCGAGCCGCG TCTGCGCGGG ATTGCCGTCG GCGCGCCGGC CGGCGCGGGG AAGAGCAGCC TGGCACGCGG CATGCGCGAC TTGTTGTGTT CCGGCGATCA ATCGGTTCCG TTTGTGGAAT TGCCGCTTGG TGTGGACGAA GCCGGTCTGC TGGGCGGACT CGACATCGAG GCGACCCTGC GCGCCGGAAG GCGTGTGGCG CGCGCGGGGG CGCTGGCGCG CGCCGATGGC GGCATTCTCT ATGCCGATCA GGTCAATCTG CTGCCCGATG CGATCATCAA TCCACTGATC GCTGCCATTG ATACCGGGGA AGTGCGTCTC GAGCGCGAAG GTCTCAGCGT TCAATCACCG GCGCGTTTCG TCTTTATCGG TTCTTACGAC CCGGCTGAAG GGCTGCCGCG CCGCCATCTG CTCGACCGAT TGGGTTTGCT GCTGGTGTTG CCGCGTGCGA TGAACGAGCA GGCGCGCACC GAGGTGGTGC GGCGCAATCT AGGGCAGGCA ACGCAAACGT TGTCGGATGC CTATGTGGAT GAACTCGATC TGCTGCGCGG GCTGGTGCAG GCGGCGCGTG AACAGTTGCC GCAGGTGCGG ATCGATGACG AACAGGTTGA ACAGTTGGTG GCGATGGCGG CGCTCTGCGG CGTTGAGGGT CACCGTGCCG ATACATTCGC GGTCTATGCT GCATGTGCAG CAGCGGCGAT AGGTCTGCGC GATCATGTTG AGCAGGAAGA CCTGGAACTG GCAGTGCGGT TGGTCATTCT GCCACGCGCG ACGCGCCTCC CGCCGCCGCC GGAACCGCCT TCTGATGATG AACCGCCTCC GCCGCCGTCC GACGCCGACA ACAACACATC CGACGCGCCG CCTGAGCCGC CGTCGGACGA TGAGTTGACC ATCCCGCCCG AACAGGTGCT CAGCGCGCTG GCTGCCGAAC TGCCGGTCGA GCTGGAACAA CTGCCGTTTC GCACGCTGCG CCGTGGGAAG ACCGGATCGC GCGGCACGGT GGCGGGAAAG CGAGGGCGGC ACATTCGCAG CATCCCCGGT GATCCGCGCC GCGGACGGAT CGATGTATCC GCCACGCTGC GGGCGGCGGC GCCGTTCCAA CCGTTGCGCC GCGCTCAGGC GAATGCGCAT GCTGCACCGT CCAGGGTATT GCTGCGCAGC GATGATCTGC GCATCAAGCA GTACCGCAGC AAGGCGGGAG CGCTCTTCCT CTTTGCAGTA GATGCAAGTG GCAGCATGGC GCTGCACCGC ATGCGTCAGG CGAAAGGCGC AGTGCAAGCG CTTCTTCAGA AAGCGTATGT TCACCGTGAC CGCGTGGCGC TGCTGGCGTT TCGCGGGCAA AACGCCGAAC TGCTTTTGCC GCCGTCGCAG AGTGTCGAAC TTGCGCGCCG CGCCCTCGAT CTCTTGCCGA CCGGCGGCGG CACGCCACTG GCGGCGGCGC TTCTGGCAGC CATCGAAGTA GCGCAGCAGG CGCGCGCGCG CGGCATTATG CAGACGGTGC TGGTGTTGCT GACCGACGGG CGGGCGAATA TCGGGTTGCG TGCCGGGCGC GAAGGGGTTG CTGACGAACT GCAAACCATC GGGCGCGCAG TGGTGGCGGC TGGCATTCAA ACGATCGTCG TTGACACCCA GCGCACCTAC CTGAGCCGTG GCGAAGCGCG CAAACTGGCA GAATGGCTTG CCGGGGAGTA TGTCTACCTC CCCAATGCCC AGGGCGAACA GATCGCTGCG CTGGCGGTCG ATCGCGTGGA GCGATAA
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Protein sequence | MSALPLPALV GLELAQQALL LLAVEPRLRG IAVGAPAGAG KSSLARGMRD LLCSGDQSVP FVELPLGVDE AGLLGGLDIE ATLRAGRRVA RAGALARADG GILYADQVNL LPDAIINPLI AAIDTGEVRL EREGLSVQSP ARFVFIGSYD PAEGLPRRHL LDRLGLLLVL PRAMNEQART EVVRRNLGQA TQTLSDAYVD ELDLLRGLVQ AAREQLPQVR IDDEQVEQLV AMAALCGVEG HRADTFAVYA ACAAAAIGLR DHVEQEDLEL AVRLVILPRA TRLPPPPEPP SDDEPPPPPS DADNNTSDAP PEPPSDDELT IPPEQVLSAL AAELPVELEQ LPFRTLRRGK TGSRGTVAGK RGRHIRSIPG DPRRGRIDVS ATLRAAAPFQ PLRRAQANAH AAPSRVLLRS DDLRIKQYRS KAGALFLFAV DASGSMALHR MRQAKGAVQA LLQKAYVHRD RVALLAFRGQ NAELLLPPSQ SVELARRALD LLPTGGGTPL AAALLAAIEV AQQARARGIM QTVLVLLTDG RANIGLRAGR EGVADELQTI GRAVVAAGIQ TIVVDTQRTY LSRGEARKLA EWLAGEYVYL PNAQGEQIAA LAVDRVER
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