| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2538 |
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| Symbol | |
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| ID | 5540020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3275358 |
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| End bp | 3277439 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894668 |
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| Product | TAP domain-containing protein |
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| Protein accession | YP_001432635 |
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| Protein GI | 156742506 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00112565 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGGACGG GCGGATTGTG TCGCCACGTT CGCCATGATG TCGGCGTCCC CACTTCACAG
AAGGAGCATT TCTTGACTCT CGCAGGACGA CGTGGCATAG CGCTGTTGAT CATCCTCCTG
ATGGCGACGG TATGGTTCCC TGCACCTCTC GCTCGCGCCG CCAGCCCGAC AGGTACGTTT
CAACCTGATG CGTGTATGTT TGAACTTCCT GCCGGCGCCG TCGAGGGACG CGACCTTGAG
TGCGGTTGGC TCCAGGTTCC AGAACGTCAC GCGCAACCGG AAGGTCCCGT CATACGCCTG
GCGGTTGCAA TTGTCAAATC GCGCGCCAGC AACCGCAAGC CCGATCCCCT GGTGATGCTC
CAGGGCGGTC CGGGCGGTTC GACAATCGAC ACCTACACCA GAATTCTCTT CAGCCCCGGC
AGCCGCCTGC GCGACCTGAT CGACCGCGAC ATCGTACTGT TCGATCAGCG CGGCGCGTTG
TACTCCGAAC CGTCGCTCGT CTGTCGGGAG CAGCTGGAAC TGGTCGAACG CACGATCGAG
CAGCGATTGA CCTACGAAGA GTCGGATCGG CTGTCGCTCG ATGCGACCGC TGCGTGTCAT
CGGCGGCTGA AGGATGAGGG GATCGACCTT TCGGCATTCA ACAGTATCGA GAATGCGGCA
GATGTCGCTG CGCTGGCGAG CGCGTTGGGA TATGCGCAGA TCAATCTCTA TGGCGTCTCC
TACGGCACAT TGCTGGCGCA GCACGTCATG CGCGATCATC CTGGCATGCT GCGCAGTGTG
ACGCTCGATG CAGTTGTGCC GACCAGTGTC AATTATCTGC TCGAGACCCC TCGCTCACAG
AACCGCGCCT ACACCGAATT GTTCACTGCC TGCGCTGCCG ACGCTGGGTG CCGGACAGCC
TATCCGAACC TGGAACAATC GCTGATTACG ACCATCGAGC GGCTCAACCG TGAACCGGCG
CGCGTGCCGA TCACCGACAA CGAAACCGGC AGAACGTACA ATGCCGTGCT CGACGGCGAC
AGTTTCGCCA GCGTCGTTTT TCAGATCATG TATTCGTCGA GTTTCATCCC GGCAGTACCG
CGGATCATCG ATGATGCAAC GCGCAACGAT TTCCGCGTGC TGGAGCGAGT GCTGCCACTC
ATCGTCTTCG ACCGCACCTT CAGTCTGGGG ATGCACTATG CCGTGATCTG CGCCGAGGAT
GCCGACTTCA CCCCTGAAGA TGCGCCGCTC CAGGGTGTGC GCCCGTTTAT TGCCCTTGAT
GGCCGACGCA GCCTTGAAGG ATACCTGGAA CGCTGCAATA TCTGGCAGGT CGATCAACTT
GCGCCGGTGG TCGATGAGCC GGTGTCCAGC GACATCCCGA CGCTTGTCTT GTCGGGCAGG
TTCGATCCGA TTACGCCGCC GGAGTTCGGC GATGTGGTCG CACGCACGTT GAGCCGGGCA
TATGTCTACA CATTTCCCGA CACCGGGCAT GGTGCAGTTG GTTCGAGCGC CTGTGCGGAT
ACCATACTCA AAGCGTTTCT CGATAATCCG TCACAGCCGC CAGATTCTTC CTGTATCGCA
GAGAGCGCAG GACCACGCTT TATTTCGCCG GACACGATCA TATTCACTCC AATAACGCTT
GCTCTGGCTA CGCTCGACGT TGCCGGTCTG GCGCCGTTTG GCGCGTTTGT CGGAGCGCTG
CTCCTGCTCC TCTCGGCATG GATCGTCTGG CCTCTTGCCT GGTTGTTCCG TCTGATCACC
GGCGGAAAAG CGCCAGAGCC GTCCCCTGGC GCGACCATCG CGCGCTGGCT TGTCGTGCTC
ACCGGCGCTG CCGGGGCGGC ATTCGTCGCC ATTACGCTGA TCAACATCGT GCAAATGGCG
GTTGCCAATG ATGCGACGAT CTTCTACGGG TTGCCGCGTT CTCTGACGCT GGTTGCGCTG
ATCTGGGGAA TGCCCGCACT GGCGTTAGCA ATTGTGGTCT GTACCGCGCT CTCCTGGACG
CGCGGGTGGT GGTCGGGCAT CGGGCGCGTC TACTACGCGC TGCTCTCATT GTCTGCTATC
GGATGCGCAT CCGCTCTGGC GTGGATGGGG GTATTCCGTT GA
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| Protein sequence | MRTGGLCRHV RHDVGVPTSQ KEHFLTLAGR RGIALLIILL MATVWFPAPL ARAASPTGTF
QPDACMFELP AGAVEGRDLE CGWLQVPERH AQPEGPVIRL AVAIVKSRAS NRKPDPLVML
QGGPGGSTID TYTRILFSPG SRLRDLIDRD IVLFDQRGAL YSEPSLVCRE QLELVERTIE
QRLTYEESDR LSLDATAACH RRLKDEGIDL SAFNSIENAA DVAALASALG YAQINLYGVS
YGTLLAQHVM RDHPGMLRSV TLDAVVPTSV NYLLETPRSQ NRAYTELFTA CAADAGCRTA
YPNLEQSLIT TIERLNREPA RVPITDNETG RTYNAVLDGD SFASVVFQIM YSSSFIPAVP
RIIDDATRND FRVLERVLPL IVFDRTFSLG MHYAVICAED ADFTPEDAPL QGVRPFIALD
GRRSLEGYLE RCNIWQVDQL APVVDEPVSS DIPTLVLSGR FDPITPPEFG DVVARTLSRA
YVYTFPDTGH GAVGSSACAD TILKAFLDNP SQPPDSSCIA ESAGPRFISP DTIIFTPITL
ALATLDVAGL APFGAFVGAL LLLLSAWIVW PLAWLFRLIT GGKAPEPSPG ATIARWLVVL
TGAAGAAFVA ITLINIVQMA VANDATIFYG LPRSLTLVAL IWGMPALALA IVVCTALSWT
RGWWSGIGRV YYALLSLSAI GCASALAWMG VFR
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