| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2527 |
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| Symbol | |
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| ID | 5540009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3260283 |
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| End bp | 3261164 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894658 |
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| Product | thioredoxin |
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| Protein accession | YP_001432625 |
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| Protein GI | 156742496 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3118] Thioredoxin domain-containing protein |
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| TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0179199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTCTCG CAAACAAAAG CGCGAGCGGC GCTGTAATCG ATGTCAACGA ACGCACCTTT
CGCGCGGAGG TGCTGGAGCG TTCGCGCACT GTTCCGGTCG TGGTCGATTT CTGGGCGCCC
TGGTGTGGTC CGTGCCGTGT GCTGGGACCG ATCCTTGAAA AACTGGCAAT CGAGGCGAAA
GGCGCCTGGA TTCTGGCAAA GTTGAATGTG GACGAAAACC CGCGCCTGGC GCAGATGTTC
CAGGTGCAGG GCATCCCGGC AGTCAAGGCG TTCCGCGATG GTCGGGTGGT GGACGAGTTC
ACCGGCGCAC TGCCTGAGTC GCAGGTGCGC GCCTGGCTGA AACGGCTCGG TCCACTTGCA
CCGGTATCGC CGGCAGATCG ACTGGCGGAT GAGGCAGCAG CGCTTGAAGA ACGCGATCCG
CTCAGCGCAA AAGCGCGCTA TGAAAGTGCG CTCAACATCG AACCCAACCA CAGTGCAAGC
CTGTTCGGAT TGGGGCGGTT GATGGTACGT GCTGGCGATC CGGCAGGCGC TGAGTTGTTG
AAGAAGATCC CCTCCGATGC ACCGCAGTGG AAGCAGGCGC AGGCATGGCT CACCCTCGCC
GACCTGATCA CTGAGGCGGA AGACACCAAT CCATCGGCGC TGCTGGAACG AATCGATCAG
AACCCGGCAG ATCTCGAGGC GCGCTGGTTG CTGGCGGCGC ATCAGGTGCG TGGTCAGCGG
TACGCCGATG CAATCGAAAC GCTGCTGGGG ATTGTTATGC GTAATCGCGC CTTTCGGGAC
GATGGTGCGC GCAAGGTGCT GCTGGCGCTG TTCACTGCGC TCGGCGATCA GCATCCGCTG
ACAGTCAAAG GTCGGCGTGA TCTGGCGAAT GTGATGTTTT AG
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| Protein sequence | MSLANKSASG AVIDVNERTF RAEVLERSRT VPVVVDFWAP WCGPCRVLGP ILEKLAIEAK
GAWILAKLNV DENPRLAQMF QVQGIPAVKA FRDGRVVDEF TGALPESQVR AWLKRLGPLA
PVSPADRLAD EAAALEERDP LSAKARYESA LNIEPNHSAS LFGLGRLMVR AGDPAGAELL
KKIPSDAPQW KQAQAWLTLA DLITEAEDTN PSALLERIDQ NPADLEARWL LAAHQVRGQR
YADAIETLLG IVMRNRAFRD DGARKVLLAL FTALGDQHPL TVKGRRDLAN VMF
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