| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2525 |
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| Symbol | |
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| ID | 5540007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3257264 |
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| End bp | 3258391 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894656 |
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| Product | phosphoribosylaminoimidazole carboxylase ATPase subunit |
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| Protein accession | YP_001432623 |
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| Protein GI | 156742494 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
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| TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0404264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATA GATTAATCGG TGTTCTGGGC GGAGGGCAAT TGGGGCGAAT GCTGGCGCTC
GCCGGTTATC CGCTCGGTTT CCGCTTCCGC TTCCTCGATC CTGCCGATGA TGCGCCGGTT
CGCTACCTGG CAGAGCAGGT TGTCGCATCA TACGACGACC ATTTAGCCGT GGCACAGTTC
GGCAGCGGGT TGATAGTCGT CACCTATGAG TTTGAGAATG TACCGGTGGC GACGGCGCGC
GCGCTCGAGC AGCATATACC GGTGTTTCCA CCGCCGCAGG CGCTTGAGGT TGCACAGGAT
CGTCTCGCGG AAAAGCGCTT CTTCACACAA CTGAACATTC CAACCGCGCC GTTCGCGCCG
GTGGACGACC GCGCGTCGCT TGATGCAGCA ATCGAGCGTA TTGGGCTGCC TGCTCTTCTG
AAGACGCGAC GCCTGGGGTA TGATGGCAAG GGGCAGGCAT TGATCGGGCA GCGTGCAGAC
ATCGAAGACG CCTGGCGCGC ACTTGGCGGG CAGCCGCTTA TCCTCGAAGG GTTTGTTTCG
TTTGTGCGTG AACTTTCCGT CCTGGCAGTG CGCGGGCAGG ATGGCGCCGT CGCGTGCTAC
CCGCCGGTCG AGAATCTGCA CCGCAATGGC ATTCTGTATC GCTCGATCGC CCCTGCGCCC
GGGCTTGCCA CCGAGGTGCA ACTGCTGGCG GAGACCTATG CGCGCCGGGT GCTCGAAGCG
CTCGACTATG TCGGCGTTCT GGCAATCGAG ATGTTTGAAG TGGAACCTGA CCGTACCGGC
GGCGCTCGCC TGCTGGCGAA CGAAATGGCG CCGCGCGTCC ACAATTCTGG TCATTGGACG
ATTGATGGCG CTGTGACGAG TCAGTTCGAG AACCACCTGC GCGCCATCGC CGGTCTGCCG
CTCGGCGACG CCTCAGCGCG CGGTTGCGCC GCGATGGTCA ACCTTATCGG CGGATTGCCC
GATGTGACGA TGCTGCTGGC GCTGCCTGAT ACTCATCTGC ACCTCTATGA CAAAGCGCCG
CGACCGGGGC GCAAACTGGG ACATGTAACC GTCTGCGCCG TGGATGCAGA GCGCCTGGCA
GAGCGCCTGG CAGTCGTCGA ACGGTATGTT CTGGCGAGCA CGAAGTGA
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| Protein sequence | MNDRLIGVLG GGQLGRMLAL AGYPLGFRFR FLDPADDAPV RYLAEQVVAS YDDHLAVAQF
GSGLIVVTYE FENVPVATAR ALEQHIPVFP PPQALEVAQD RLAEKRFFTQ LNIPTAPFAP
VDDRASLDAA IERIGLPALL KTRRLGYDGK GQALIGQRAD IEDAWRALGG QPLILEGFVS
FVRELSVLAV RGQDGAVACY PPVENLHRNG ILYRSIAPAP GLATEVQLLA ETYARRVLEA
LDYVGVLAIE MFEVEPDRTG GARLLANEMA PRVHNSGHWT IDGAVTSQFE NHLRAIAGLP
LGDASARGCA AMVNLIGGLP DVTMLLALPD THLHLYDKAP RPGRKLGHVT VCAVDAERLA
ERLAVVERYV LASTK
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