Gene Rcas_2515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2515 
Symbol 
ID5539997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3244679 
End bp3245797 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content62% 
IMG OID640894646 
Product6-phosphofructokinase 
Protein accessionYP_001432613 
Protein GI156742484 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0205] 6-phosphofructokinase 
TIGRFAM ID[TIGR02483] phosphofructokinase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATCG ATACCGCCTC ACGACTGCGC ATTGCCATCT GCACCGGCGG CGGCGATGCA 
CCCGGCCTGA ATGCCGTCAT CCGGGCAGTG GTGTTGAGCG CACTCAACCG CGGATGGGAG
TGTTATGGCA TTCGCGATGG CTTCAATGGC ATTCTTTCAC CGAAAAGTTA TCCGCGCGGC
GGGGTCATTC CGCTGACTCG CGATACGGTG CATGGCATTA CGCCGCTTGG CGGCACGATT
ATCGGCACAA CCAATCGGGG CAATCCGCTG CGCTATCCGA CACTACTGCC CGATGGCACG
GTGATCGAGC GTGATCGCAC CGACGAGATA GTGAACGGAC TGGCAGTGTA TGGCATCGAT
GCCCTGATCT CGGTCGGCGG CGATGGTTCG ATGGAAATTG CTTCGGCGCT GACCCGCAAA
GGGGTGCGCG TGATCGGCGT TCCCAAAACG ATTGATAACG ACCTGGACGG CACGGTGGCA
ACCTTCGGGT TCGATACGGC GGTTGCCTTT GCCACAGAAG CGATCGATCG CCTCCATACA
ACCGCCGAAG CGCACCAGCG GGTGATGGTG GTTGAGGTGA TGGGGCGCTA CGCTGGCTGG
ATTGCGCTCA ACGCTGGCGT GTCCGGAACC GCGCATGCGG TTCTTATTCC CGAAATTCCG
TATGATATTC ATAAAGTGGC TGCCAAGATC AAGAGTCGTG AAGCCGAAGG ACGCCCCTAC
TCGGTGGTCG TGGTCGCCGA GGGCGCTCGC CCAATTGAGG GGAGCGTTTC GCTGATTGCG
CCAAAGGAGG CCGGGCGCGC CGAGCGGTTA GGAGGTATCG GCGAGCGTGT CGCGCGGGAA
CTTGAAGCCT TGACCGGCAG AGAGACGCGC GTGGTGGTGC TGGGGCATCT GCTGCGCGGT
GGCACGCCAA CCACCTTCGA CCGATTGCTG GCGCTCCGTT TTGGCGCTGC TGCCGTGCGT
GCCCTGGAAG AAGGTCAGTC CGGCGTGATG GTCGCGCTCG ATCCGCCGAC CGTGCGGTAT
GTGCCGCTGG AAGAAGCGAC GCGCCGCATG AAAACCGTCC CGCTCGACTC GGATACCATG
CTGACTGCGC GTGACCTGGG AATCTCTTTC GGCGACTGA
 
Protein sequence
MTIDTASRLR IAICTGGGDA PGLNAVIRAV VLSALNRGWE CYGIRDGFNG ILSPKSYPRG 
GVIPLTRDTV HGITPLGGTI IGTTNRGNPL RYPTLLPDGT VIERDRTDEI VNGLAVYGID
ALISVGGDGS MEIASALTRK GVRVIGVPKT IDNDLDGTVA TFGFDTAVAF ATEAIDRLHT
TAEAHQRVMV VEVMGRYAGW IALNAGVSGT AHAVLIPEIP YDIHKVAAKI KSREAEGRPY
SVVVVAEGAR PIEGSVSLIA PKEAGRAERL GGIGERVARE LEALTGRETR VVVLGHLLRG
GTPTTFDRLL ALRFGAAAVR ALEEGQSGVM VALDPPTVRY VPLEEATRRM KTVPLDSDTM
LTARDLGISF GD