Gene Rcas_2513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2513 
Symbol 
ID5539995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3242225 
End bp3243382 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content58% 
IMG OID640894644 
Product6-phosphofructokinase 
Protein accessionYP_001432611 
Protein GI156742482 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0205] 6-phosphofructokinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCG GAATTCTGAC TGGCGGTGGT GATGTTCCCG GTTTGAACCC CTGTATCAAG 
GCCGTGGTGA ATCGCGCCAA CGACGCCGGG ATCGAGGTGA TCGGCATTCG ACGCGGCTGG
GCCGGGTTGC TCTACTACAA TCCGGACGAT CCGGAGAGTG CATCGGAGTG GGTACAGCCC
CTTACAAAAG CGGACGTTCG CACGATTGAC CGCTACGGTG GAACGCACCT GCACACATCA
CGCACGAACC CGCAGAAGGT GCGGGAGAAG GATATGCCCG AATTTCTCAA AGGCAGGTTC
GAATTCTCCG GCGAAAAGAA GACCGCTGAC TGCACGCCGC ACGTGTTGCG CGTGCTCGAA
CACCTCGGCA TCGATACGCT TGTGCCGATT GGCGGCGACG ACACCCTCTC TTACGCAGTG
CGCATGCATC GCGAGGGGGT GCGGGTGATC GCCATCCCTA AGACGATGGA TAACGACGTG
TTTGGCACCG ATTACTGCAT CGGTTTCTCA ACGGCGGTCA CGCGCAGTGT CGATTTTCTC
AACGCCCTCC GCACACCGAC CGGCTCGCAC GAGCGTATCG CAGTGATCGA GTTGTTTGGG
CGCAACTCGG GTGAAACGGC GCTCATTTCG GCGTATCTCG CGGATGTTGA TCGCGCTGTT
ATCTCCGAAG TGCCGTTCGA TGTCGAAAAA CTGGCGCGCT TCCTGGTCGA AGACCGCAAA
CGAAATCCGA GCAACTATTC CATCTGTGTC ATCTCAGAAG GCGCATCAAT GATCGGCGGT
CAGGTGGTCG AGTATGGGCA GGAAGACGCT TATGGGCACC GGAAACTCGG CGGCATCGGC
ATGATCACCG GCGAGGCGAT CAAAAAGATC ACCGGCATCG ACATCGTTTA TCAGCAACTA
TCGTATCTGA TGCGCGCCGG CGCTCCCGAC TCGCTCGACC GGATGGTGGC TATCTGCTAC
GGGAACCTTG CAGTCGATCA GTTGCTCCAG GGGCACAGTG GTCGTATGGT GGCGCTCCAG
AACGGTCAGT ACACCACCGT TCCGGTCGAT ACCTGTGTGC AGGGGGTCAA GCGGGTCGAT
GTCGAAGAAC TGTATGATAC GGAAAACTAT CGGCCGCGGG TCAAACACCC GCTCGGCAAG
CCGATGTTCC TGTACTGA
 
Protein sequence
MRIGILTGGG DVPGLNPCIK AVVNRANDAG IEVIGIRRGW AGLLYYNPDD PESASEWVQP 
LTKADVRTID RYGGTHLHTS RTNPQKVREK DMPEFLKGRF EFSGEKKTAD CTPHVLRVLE
HLGIDTLVPI GGDDTLSYAV RMHREGVRVI AIPKTMDNDV FGTDYCIGFS TAVTRSVDFL
NALRTPTGSH ERIAVIELFG RNSGETALIS AYLADVDRAV ISEVPFDVEK LARFLVEDRK
RNPSNYSICV ISEGASMIGG QVVEYGQEDA YGHRKLGGIG MITGEAIKKI TGIDIVYQQL
SYLMRAGAPD SLDRMVAICY GNLAVDQLLQ GHSGRMVALQ NGQYTTVPVD TCVQGVKRVD
VEELYDTENY RPRVKHPLGK PMFLY