| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2511 |
|---|
| Symbol | |
|---|
| ID | 5539993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 3239648 |
|---|
| End bp | 3240811 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640894642 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001432609 |
|---|
| Protein GI | 156742480 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAGG TGCGCGATCT GCTGATCATT GCCGGTCTGT TTGGCGTTCT GATCGTCTTT
GTCGTTGCCG GTCCAGGGCG AACACTGCCA CAGGACCCCA ACCTTCCCAG CACGTACTCA
ACTGCGCCGA CCGGGGCGCT TGCGCTGTAC GAATGGACGC GCGCGCTAGG GTATGATGCG
CGCCGACTCG AGTATCGTCG CTTCGAGGTC ACCGATGACG ATGCAGTGCT GGTGATCCTT
AGCCCAAGCG AGCCAATCAG TCGCGCCCAT GCGCGCGACA TTCTGGCGTG GGTCGAGCGT
GGCGGGACGC TGATCTTCGC CGACGATGCG CCGACGGGCT TCAGCGCGTC GGATGCATTG
CTCGATGCGT TGCAGGTGCG GACCACCGTT CTCACCGACA CATCGATCGT CGAGCGCGCG
CCAGCGTTGC AGCCGGTATT CGATCAACCG CCGGTGCGCG AAATCTCGGT TCGCACCCGG
CGCACACTCG AATTCCAACG AAACGACTAT GCGCCTCTGT TTGGCGCTTC CGGTCAGGTT
CTGATTGCGG GCATCCGGAT CGGCAGCGGC TATGTGTACG TCAGTGCAAG TGTGCAACTG
TTCACAAACA GCGGGTTGCG CGATCCGCAA AATGCGGCGC TGGTGTTGAA TATGCTGCGA
CGCCTGCCGC CGGGTGGGCG TATTCTGTTC GATGAGTATC ATCACGGGCT GATAGCGCCT
CCATCGCCAA CCGATGGATT GCTCACCACG CCGTGGGGGT GGGCGGGGGT CTATGTCGCA
ACAGCAACGG CGCTGTTCCT GTTGCTGGGC GGGCGACGCT TCGGTCGCGC TGTACCGCTC
AAGGAAGAGA CTGCACGCCG CAGCAGCGCA GAGTACCTCG ACAGCATGGC GGACCTGTAT
CGGCGCGGCG GCAAACGCCG GTACATGCTG CAACACTTCT ATGCCGATTT CAAGCGTCGG
CTTGCGCAGC CATACGGGAT CAATCCGCAC CTTGAGGATC GTGAATTCGT GTATCAATTG
GCACGAGTGC GTCCCATCGA CGAGGCGGCG CTGCTGGCGC TGCTTTCGCA ACTGCGGGCA
ACGCCGTCGT CCGATGCCGA TCTGTTGCGC ATCGTTGCGG CAGCGGACGC ATTCATTGCC
GCACAGGCGC GCGAGCGATT ATAA
|
|---|
| Protein sequence | MTQVRDLLII AGLFGVLIVF VVAGPGRTLP QDPNLPSTYS TAPTGALALY EWTRALGYDA
RRLEYRRFEV TDDDAVLVIL SPSEPISRAH ARDILAWVER GGTLIFADDA PTGFSASDAL
LDALQVRTTV LTDTSIVERA PALQPVFDQP PVREISVRTR RTLEFQRNDY APLFGASGQV
LIAGIRIGSG YVYVSASVQL FTNSGLRDPQ NAALVLNMLR RLPPGGRILF DEYHHGLIAP
PSPTDGLLTT PWGWAGVYVA TATALFLLLG GRRFGRAVPL KEETARRSSA EYLDSMADLY
RRGGKRRYML QHFYADFKRR LAQPYGINPH LEDREFVYQL ARVRPIDEAA LLALLSQLRA
TPSSDADLLR IVAAADAFIA AQARERL
|
|---|
| |