| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2506 |
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| Symbol | |
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| ID | 5539988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3232268 |
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| End bp | 3234394 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894637 |
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| Product | hypothetical protein |
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| Protein accession | YP_001432604 |
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| Protein GI | 156742475 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1287] Uncharacterized membrane protein, required for N-linked glycosylation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCAGA GAGTCAGAAC TAGCGCCTCT ATGCTGCCGA CGCTTGGCTA CCTGGCGCTC
AGCCTGATCA TTATGGCGCC GGTGCTGCCG GTTTTTACCA CGGCTATCCC TGGCGGTCCA
ATCGCGGAAG TCGATGGATG GCAAAACGTC TGGAACCTCT GGTGGGTGCA TCGCGCGCTG
GCGACGCCGA CCAATCCGTT CTTTACACCC CTGCTGTTCT ATCCACAAGG CGTCGATCTC
ACACTGCAAA CGCTCAACAT CAGCAATGGC ATTCTGTTTC TGCCGGTGAC GGCGCTCTTT
GGTCCGATTG CCGCATACAA TGCCGCTGTT CTGACGGCGC TGGTTCTGTC GGGTGTCGGC
GGGTACGCCC TGGCGCTGCG GGTGAGCGGG GATCGTCTGG CGGCGTTCAT CGGCGGCGCC
ATCTTCGCCT TTTCGCCGTT TCACCTGACG AAAATCTGGG ATGGTCAACT GGAGATGATC
ACGCTGCAAT GGGCGGCGTT CTATGCGTTC TTCCTGTTAC GCGCGGTTGA AGATTTGCGG
CGGCGCGATG CGCTGATCGC CGGCGTCTTT CTGGCGCTGA CGGGATACAC GAGCTGGTAC
TACCTGTTCT TTTTCGGGGT CTACACCCTC TTGTTTGCAG CAATCTGGCT GGCAGGCGCC
GCGCGTGAGC GGCGAGTTCC GATGCTCCGG CAGTTTATGT TCACCGCCGC GAGTGGTGTA
ACGCTGCTGC TGCCGTTGCT CATCGCGGCG GGACGCACTG CTCTTACGAC GACCGGTGTC
ATTGGTATGC GGTTCGACCC GTCCAATCCG CTCGACCTTA TCCTGATTCA TTCCGCCAAT
CTCTATGATT TGTTCCTTCC CAACGGTCTG CATCCATTGT GGGGAAGCGC TGTGGAGACG
CTGGTGCGCA CATGGCATCC CTACATCGGC GCCTGGAATA TCGCGCTCGG CTATACAGCG
CTGGCGCTGG CGACGGCTGC GCTGGCGCTG GCGCGCAGCA ACGCATGGCG CTGGGCGGTG
ATCGGACTGG CGGCTATTGT GTTGTCGCTT GGTCCTCTCG TTCACATCGG CGCAACGCGG
ACCGCGATCC CATTGCCGTA TCAGATTCTG CTGGCGCTGC CAGGACTGGA ACTGGCGCGT
CGTCCCAGTC ACTTTGTCGT TATTGCAACT CTGATGCTGG CGCCGCTCGC GGCGCTTGGA
CTTCAGGCGT TACGTCAGCG GGCGACTCAT CGCCACGGGT ATCTGCTGGC GGGAGTGACG
CTGGCAGCCA TCGCTTTCGA GTACGCGCCG CCACACTGGT CGCTCTTCCC ATTCCGTATC
CATCCCTACT ACGCCCAGAT ATCCGCCGTT CCCGGAGCGG TTATCGAGAT ACCGCCGTTG
CTCGAAGCCA GCCTGCCGCT CAAGGCGCAG ATCGTGCATG GGCAGCCGTT AGTCGGCGGA
TTCGTCTCAC GTCCGCCGCG CTACCGGTTT GTCGAACAGG CGCCGGGGGT GCGTCAACTC
TGGACAATGC GACCTGACGA TACCCATCTC TTTGTTGATC GAGCAGATAA CCGATTGAAG
GAGTTCAATG CCTATGGCGT GCGTCATATC ATCATCCACT GGGCGTGGGT CGCGCCGGAA
CGTCGTGCGG AGCTTCAGGC GGCGCTGCGG CAGGCGCTTG GCGATCTTGC GCCGGTGTAC
GCAGACGAGG AGTTGAGCGC ATACCGTGTG CCGACAATGG ATTCGGGGAC AGTTGCATAC
GCATCATTCG GCGATGGATG GCATACCGAA GAGCGAGACG GCGATCGGCG CTGGCGCTGG
ATGGGACCGG AGGGGGAAAT CGTGCTGGTG AATGCCGGGG AGCACGATGC GCCGGTTCGT
CTGTCGCTCG ACGTGCGATC CTACGCAGAA GCGCGTCAGG TTATGCTGCT GTTTGATCAG
CATCTGCTGG GTGATCGGCT TGTCGAACCA GCAGGCGTCC GATTGTCGAT CCACCTGCTT
CTGCCCCCTG GCGAACATCG TGTGCTTTTG CGCGCAAATG CGATGCCCGA TCCGGCTCTT
CCGGCGCGAT TGATCAGTAT TGTCGTTTCT GATGCTCATC TGCAAACCAT TCAGCGGCGC
ATCGATGCAC TGGCACAGAA GATGTAG
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| Protein sequence | MWQRVRTSAS MLPTLGYLAL SLIIMAPVLP VFTTAIPGGP IAEVDGWQNV WNLWWVHRAL
ATPTNPFFTP LLFYPQGVDL TLQTLNISNG ILFLPVTALF GPIAAYNAAV LTALVLSGVG
GYALALRVSG DRLAAFIGGA IFAFSPFHLT KIWDGQLEMI TLQWAAFYAF FLLRAVEDLR
RRDALIAGVF LALTGYTSWY YLFFFGVYTL LFAAIWLAGA ARERRVPMLR QFMFTAASGV
TLLLPLLIAA GRTALTTTGV IGMRFDPSNP LDLILIHSAN LYDLFLPNGL HPLWGSAVET
LVRTWHPYIG AWNIALGYTA LALATAALAL ARSNAWRWAV IGLAAIVLSL GPLVHIGATR
TAIPLPYQIL LALPGLELAR RPSHFVVIAT LMLAPLAALG LQALRQRATH RHGYLLAGVT
LAAIAFEYAP PHWSLFPFRI HPYYAQISAV PGAVIEIPPL LEASLPLKAQ IVHGQPLVGG
FVSRPPRYRF VEQAPGVRQL WTMRPDDTHL FVDRADNRLK EFNAYGVRHI IIHWAWVAPE
RRAELQAALR QALGDLAPVY ADEELSAYRV PTMDSGTVAY ASFGDGWHTE ERDGDRRWRW
MGPEGEIVLV NAGEHDAPVR LSLDVRSYAE ARQVMLLFDQ HLLGDRLVEP AGVRLSIHLL
LPPGEHRVLL RANAMPDPAL PARLISIVVS DAHLQTIQRR IDALAQKM
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