| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2497 |
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| Symbol | |
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| ID | 5539978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3219035 |
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| End bp | 3220879 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894627 |
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| Product | ABC transporter related |
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| Protein accession | YP_001432595 |
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| Protein GI | 156742466 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCACA TGCTGCAACG GGTTGCCGAA CTACCACAGG AACAGGCTGA AAGCCGCGGC
GCAGTCGCGC GGCGATTGCT CGGTTATCTG CTTCCCTACT GGAAGCGACT GCTGGCGATT
CTGGCGCTGG TCGCCATTGC TGCTGCTTCA CAGGCGCTTG GTCCCTTGCT GATCGGCGTG
GCGATCGATA GCGCGATTGC GCAGCGTGAT GGCGGTGAAC TGAACCGCCT GATGCTGGCG
CTCCTTGTAG TGTATGTCGC CGGCATGGCT GCCGGACGTT ATCAGTTTAT GCTGATGGGG
GAAGTCGGGC AGCAGGTGCT TGCTCATTTG CGCAGTGAGA TCTTTGCTGC GCTGCAACGC
ATGTCGCTCC GTTTCTTTGA TCGTCGCCCG GCAGGCGAGT TGATGTCGCG TCTGGTGAAT
GATACCGAAG TCATCACGCA GTTGATGGGA CAGGGGCTGG TGCAGGTGCT CGGCAGCCTG
TTCGGGTTGA TCGGGATTCT GGTAGCAATG GTGGCGCTCG ACTGGCGCCT GGCGCTGGCG
AGTTTTATCG TTATTCCGGT AATGATCTGG ATGACCAGTC TGTTTTCGCA GATGTCGCGG
CGGGCGTTTC GCCGCACCCG CGAAGCGATC GGCGACGTAT CGGCGGAAAT CCAGGAGGAG
ATCGCCGGTG TCAAGGTCGC ACAGGCGTTT ACGCGCACCA ATTTGAACCA ACAGCGTTTT
GCGCAGCGCA ACGCTGCCAA CCGTGATGCG AACGTCAGTG CTACGGCGAT TACATCGGCG
TTTATGCCAG CGGTCGATGT GCTTTCGACA GTCGCCATTG CCATCGTCGC TGGGTTCGGC
GGATGGCTGG TGATCCAGGA AGCGGTCACG GTTGGCGTGG TGGTCGCATT TCTTACCTAT
GTGCAGCAGT TCTTCCGCCC GGTGCAGGCG CTGTCGGCAT TCTACACCAC GGCGCAGTCG
GCGCTGGCGG CAGGGGAGCG AATCTTTGCG CTGATCGATA CGCCGCCCGA CCTGGTGGAC
GCGCCGGACG CGCAACCGCT GGGACGGATC GAAGGGCGCG TGGAGTTTGA TCATGTCTGG
TTCAGTTACA GCGTCCGCCC GGGGGAACAA CTTCGAGACG AGGAGCGGTA TGTCCTGAAG
GACATTTGCC TGACGGCGGA ACCAGGGCAG GCGATTGCGC TGGTGGGACC GACCGGCGCT
GGGAAGACGA CGCTCGTTAA CCTGATCGGG CGATTCTATG ATGTCAGTGC CGGAGCCGTC
CTGATCGACG GTATCGATGT GCGGAAGGTC ACTCGTGCCA GTCTGCGGTC GCAGATGGGA
GTTGTGCTCC AGGACAGTTT TCTCTTTTCG GGAACGATTG CCGATAACAT CCGTTATGGA
CGGCTCGACG CCACGGATGC AGACGTTGAG GAAGCGGCGC GCGCTGCGAA TGCCCACGAG
TTCATTATGC GCCTGCCGGA TGGGTACCAG ACGCAGTTGA GCGAGCGCGG CGGCAACCTC
AGCCAGGGGC AGCGGCAGTT GATCGGCATT GCGCGCGCGA TCCTGGCAGA CCCGCGTATC
CTGATCCTCG ACGAGGCGAC CAGTAGCGTC GATACCCGCA CCGAGCAGTT GATCCAGCAG
GCGCTGCGAC GGTTGTTGCG CGGGCGCACC AGTTTTGTGA TTGCCCACCG TCTTTCGACC
ATCCACGACG CCGATCTGGT GCTGGTGCTC GATCAGGGGC GGATCGTCGA GCGTGGAACT
CACGACGAAT TGCTGGCACG CGGCAGGCTG TACGCCGAAT TGCATCGTCG TCAGTTCCGT
GATGAGCCGG TGGTCAGGCG TCAGGTGTCA GGCGTCAGGC GTTAG
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| Protein sequence | MMHMLQRVAE LPQEQAESRG AVARRLLGYL LPYWKRLLAI LALVAIAAAS QALGPLLIGV
AIDSAIAQRD GGELNRLMLA LLVVYVAGMA AGRYQFMLMG EVGQQVLAHL RSEIFAALQR
MSLRFFDRRP AGELMSRLVN DTEVITQLMG QGLVQVLGSL FGLIGILVAM VALDWRLALA
SFIVIPVMIW MTSLFSQMSR RAFRRTREAI GDVSAEIQEE IAGVKVAQAF TRTNLNQQRF
AQRNAANRDA NVSATAITSA FMPAVDVLST VAIAIVAGFG GWLVIQEAVT VGVVVAFLTY
VQQFFRPVQA LSAFYTTAQS ALAAGERIFA LIDTPPDLVD APDAQPLGRI EGRVEFDHVW
FSYSVRPGEQ LRDEERYVLK DICLTAEPGQ AIALVGPTGA GKTTLVNLIG RFYDVSAGAV
LIDGIDVRKV TRASLRSQMG VVLQDSFLFS GTIADNIRYG RLDATDADVE EAARAANAHE
FIMRLPDGYQ TQLSERGGNL SQGQRQLIGI ARAILADPRI LILDEATSSV DTRTEQLIQQ
ALRRLLRGRT SFVIAHRLST IHDADLVLVL DQGRIVERGT HDELLARGRL YAELHRRQFR
DEPVVRRQVS GVRR
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