Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2496 |
Symbol | |
ID | 5539977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3217665 |
End bp | 3218819 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640894626 |
Product | hypothetical protein |
Protein accession | YP_001432594 |
Protein GI | 156742465 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAACAT CCATCCCCCT CTTTACCGTC ACCCTCGGAA CCGATGCAGA ACTAGCGTCG AAGATCGCTG CCGGATTACA GTCCGGCGCT TACGAACTGA TCGGCGGCGT GGTGCGTGAC ACAGGCAGCA AGCAGATCGT CGCCTGGCTG CGTCAGGTTG GTCATATCGC TCCTGCTGCG CTGCCGACTT CCGTGATGGG ACCGCTCGCA TTCCAGGCAC TGATCGCATC AACATCACTT CTGACCCTCG GCGTGACCGT TATCGGATTC GCGCTCATGA GGAAGCGCCT GGATACGATT GCGAAAGACA TCGCTTCGAT CAAGCAAACA CTGGAACGGA TGGAGCGAAA ACTGGACCTG TCTCTTGACG CAAAAGTCCG CACCGCGCTC GATCTGGCGC GCAGAGCGTT TGAGATGCAC GATCCGGTCA ACCGGCGAGA TCACGCGCAT CAGGCGGCAA CCATGTTTCT TGAGGCTGAA CACTACTATC GCAGCTTGCT GGACGCCGAA TACGGAGAAG GGGGATGGCT GATCGCCCCG TTGCTCAAAA CATTGACCCT GGCGCGTGTT GGCGCGGCGC GCTGTTACCT TGGGCTGGGC GAAACGGCGG CAGCGCGGAG TCTGCTCAGT GAAGGATACA TCGTGCTCGA ACCGTATGTT CAGCGGTGGT TCGATGCCGT CGTCGGCGTC CGACCGGCGC TCGTTCTCCA TCCAGCGACC GGCATTTCGC TTGAACGGTT GACACTGCTG ATGCGCTATC GCCAACATGA CCCGGCGCTC AGCGGGACGG CTGTGTTTGA ACAACTGCGC GCCGAGCTGT GGAAAAGCGC CGTACAGGAC ATCAATCAAT GGCGACAACC CTTCCCGCCC GTGTTACGGG AAGACCCGGA AGTGACGCCT CTCGACTGGG CGCTTCATCG TGAAAAGATT ACTACCCGCT TCCTGGCGCG CCTGGCAGAC ACATGCACGC AGATTGAAAC GGTCTATGCC GCAGTGCGCT GCATCGAGGG CTACCGGCTC GAACTCGAAC AGATCGAGCG TATGGGGCTA TCACCGGACG AACTCGATCA GCAGTGCGCG CTCCTGTCGT CGGACAGCGC GTTGATCGTG CATGTTCCGA AGGGCTCAGA ACTCGCCAGA CACGTGATCG TCTGA
|
Protein sequence | MTTSIPLFTV TLGTDAELAS KIAAGLQSGA YELIGGVVRD TGSKQIVAWL RQVGHIAPAA LPTSVMGPLA FQALIASTSL LTLGVTVIGF ALMRKRLDTI AKDIASIKQT LERMERKLDL SLDAKVRTAL DLARRAFEMH DPVNRRDHAH QAATMFLEAE HYYRSLLDAE YGEGGWLIAP LLKTLTLARV GAARCYLGLG ETAAARSLLS EGYIVLEPYV QRWFDAVVGV RPALVLHPAT GISLERLTLL MRYRQHDPAL SGTAVFEQLR AELWKSAVQD INQWRQPFPP VLREDPEVTP LDWALHREKI TTRFLARLAD TCTQIETVYA AVRCIEGYRL ELEQIERMGL SPDELDQQCA LLSSDSALIV HVPKGSELAR HVIV
|
| |