Gene Rcas_2477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2477 
Symbol 
ID5539958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3186249 
End bp3187400 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content58% 
IMG OID640894607 
ProductAAA family ATPase 
Protein accessionYP_001432575 
Protein GI156742446 
COG category[R] General function prediction only 
COG ID[COG1373] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATTC CACGCCCTAC GGTTATCAAT CAGATTACGC GCCTGCTGGC GATCCACCCG 
ATTGTCGCCC TTCTGGGTCC GCGACAATGC GGCAAGACGA CGGTAGCGCG GATGGTTGGC
GAGCAGCAAG CGTCTACCTA TTTTGACCTT GAAAATCCGG TGGATATACG GCGTCTCTCT
GCGCCGTTGA CCGTTTTAGA AACCCTCTCC GGGCTGATCA TCATCGATGA GGTGCAGCAA
CGCCCTGATC TCTTCCAGTT GCTGCGCGTG CTGGTTGATC GTCCACAGAA CAACGCCCGG
TTTTTGCTCC TGGGATTCGC CTCGCCGCAT CTTGTACGCA GCGCGTCGGA GTCGTTGGCG
GGTCGCATCG GATTCGTGGA TCTTTCAGGG TTCGATCTGA CCGAAGTAGG CGTGGCGCAA
CGCGACCGGC TTTGGGTGCG CGGCGGCTTT CCCCGGTCGT TTCTCGCCGA TGACGATCCA
AGCAGTATGG CATGGCGCGA GGCGTTCATC CGAACATTTC TGGAACGCGA TATTCCGCAG
TTGGGGATTA CTATTCCTGC GGAAGCCCTG CGCCGCTTCT GGACAATGGT CGCCCACTTT
CACGGTCAGC AATGGAACGC CGCCGAATTC GCGCGCTCGC TGGGCGCATC CGAGTCCACT
GCACGACGCT ACCTGGATAT TCTGGGCGGC GCGTATATGG TGCGTGTGCT GCCGCCGTGG
TTCGAGAATC TGGGGAAGCG ACAGGTCAGG TCGCCTAAAG TATACATCCG GGACAGTGGC
ATTTTGCATG GACTATTGCA CTTGGAAACG CTGGCTGACG TTCAGTCGCA TCCCAAACTG
GGCGCTTCGT GGGAGGGATT CGCTGTTGAA CAGATCATTC GACTGCTGGA TACGCGCGAT
GCATATTTCT GGGCAACCCA TAGCGGCGCC GAACTCGATC TGCTGGTCCA TCTCCGCGGC
AGGCGTTATG GGTTCGAGAT CAAATATGCC GATGCTCCTG GCGTCACCCG TTCGATGCGT
ATTGCCCTGA GCGACCTGGG TCTGGAACAC CTGTGGGTCA TCTATCCAGG GAGGCAGGAG
TACGCCCTCA CCACGCAGAT CACCGTCTTG CCGCTTGATG CATTGCCTCG CATAGCATCG
GCATTGCGTT AG
 
Protein sequence
MLIPRPTVIN QITRLLAIHP IVALLGPRQC GKTTVARMVG EQQASTYFDL ENPVDIRRLS 
APLTVLETLS GLIIIDEVQQ RPDLFQLLRV LVDRPQNNAR FLLLGFASPH LVRSASESLA
GRIGFVDLSG FDLTEVGVAQ RDRLWVRGGF PRSFLADDDP SSMAWREAFI RTFLERDIPQ
LGITIPAEAL RRFWTMVAHF HGQQWNAAEF ARSLGASEST ARRYLDILGG AYMVRVLPPW
FENLGKRQVR SPKVYIRDSG ILHGLLHLET LADVQSHPKL GASWEGFAVE QIIRLLDTRD
AYFWATHSGA ELDLLVHLRG RRYGFEIKYA DAPGVTRSMR IALSDLGLEH LWVIYPGRQE
YALTTQITVL PLDALPRIAS ALR