Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2477 |
Symbol | |
ID | 5539958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3186249 |
End bp | 3187400 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640894607 |
Product | AAA family ATPase |
Protein accession | YP_001432575 |
Protein GI | 156742446 |
COG category | [R] General function prediction only |
COG ID | [COG1373] Predicted ATPase (AAA+ superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCATTC CACGCCCTAC GGTTATCAAT CAGATTACGC GCCTGCTGGC GATCCACCCG ATTGTCGCCC TTCTGGGTCC GCGACAATGC GGCAAGACGA CGGTAGCGCG GATGGTTGGC GAGCAGCAAG CGTCTACCTA TTTTGACCTT GAAAATCCGG TGGATATACG GCGTCTCTCT GCGCCGTTGA CCGTTTTAGA AACCCTCTCC GGGCTGATCA TCATCGATGA GGTGCAGCAA CGCCCTGATC TCTTCCAGTT GCTGCGCGTG CTGGTTGATC GTCCACAGAA CAACGCCCGG TTTTTGCTCC TGGGATTCGC CTCGCCGCAT CTTGTACGCA GCGCGTCGGA GTCGTTGGCG GGTCGCATCG GATTCGTGGA TCTTTCAGGG TTCGATCTGA CCGAAGTAGG CGTGGCGCAA CGCGACCGGC TTTGGGTGCG CGGCGGCTTT CCCCGGTCGT TTCTCGCCGA TGACGATCCA AGCAGTATGG CATGGCGCGA GGCGTTCATC CGAACATTTC TGGAACGCGA TATTCCGCAG TTGGGGATTA CTATTCCTGC GGAAGCCCTG CGCCGCTTCT GGACAATGGT CGCCCACTTT CACGGTCAGC AATGGAACGC CGCCGAATTC GCGCGCTCGC TGGGCGCATC CGAGTCCACT GCACGACGCT ACCTGGATAT TCTGGGCGGC GCGTATATGG TGCGTGTGCT GCCGCCGTGG TTCGAGAATC TGGGGAAGCG ACAGGTCAGG TCGCCTAAAG TATACATCCG GGACAGTGGC ATTTTGCATG GACTATTGCA CTTGGAAACG CTGGCTGACG TTCAGTCGCA TCCCAAACTG GGCGCTTCGT GGGAGGGATT CGCTGTTGAA CAGATCATTC GACTGCTGGA TACGCGCGAT GCATATTTCT GGGCAACCCA TAGCGGCGCC GAACTCGATC TGCTGGTCCA TCTCCGCGGC AGGCGTTATG GGTTCGAGAT CAAATATGCC GATGCTCCTG GCGTCACCCG TTCGATGCGT ATTGCCCTGA GCGACCTGGG TCTGGAACAC CTGTGGGTCA TCTATCCAGG GAGGCAGGAG TACGCCCTCA CCACGCAGAT CACCGTCTTG CCGCTTGATG CATTGCCTCG CATAGCATCG GCATTGCGTT AG
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Protein sequence | MLIPRPTVIN QITRLLAIHP IVALLGPRQC GKTTVARMVG EQQASTYFDL ENPVDIRRLS APLTVLETLS GLIIIDEVQQ RPDLFQLLRV LVDRPQNNAR FLLLGFASPH LVRSASESLA GRIGFVDLSG FDLTEVGVAQ RDRLWVRGGF PRSFLADDDP SSMAWREAFI RTFLERDIPQ LGITIPAEAL RRFWTMVAHF HGQQWNAAEF ARSLGASEST ARRYLDILGG AYMVRVLPPW FENLGKRQVR SPKVYIRDSG ILHGLLHLET LADVQSHPKL GASWEGFAVE QIIRLLDTRD AYFWATHSGA ELDLLVHLRG RRYGFEIKYA DAPGVTRSMR IALSDLGLEH LWVIYPGRQE YALTTQITVL PLDALPRIAS ALR
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