| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2468 |
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| Symbol | |
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| ID | 5539949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3169040 |
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| End bp | 3171166 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640894598 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_001432566 |
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| Protein GI | 156742437 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.449772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACGCCC TGAACGAGGT TCTCACTCTA TCAACATCTA TGCCCCTGCG ACACTACGCC
GAGCATCTTC TAAAGCAGGC GCTACGCAAT CCATCAGCAA CTTTTCGAGA CGGTCAATGG
GAAGCAATTG CCGATCTGGT TGAACGTCGC GCGCGTCTGC TCGTCGTGCA GCGCACCGGT
TGGGGCAAGA GTCTGGTCTA TTTCCTGGCG ACACGCTTGT TGCGTGAACG TGGATCAGGA
CCGACACTGC TCATCTCGCC CTTGCTTGCA CTCATGCGCA ACCAGTTGCT TATAGCAGAG
CGTGTTGGCG TTCGTGCTGC AACGATCAAT TCAAGCAACA AGAACGAATG GACCAACGTG
CTATCCCACC TCCACGCTGG CGGTATCGAT ATGCTTCTCG TTGCACCCGA ACGTTTGGCA
AACGACGAGT TCCGCAGTGA GGCGCTGCGC CCGATTGCCG ACACGATCAG CTTGTTCGTT
GTTGACGAAG CGCATTGCAT CTCGGATTGG GGCCACGATT TTCGTCCCGA TTACCGCCGG
ATCGCTCGTG TGCTCCAAAT GCTTCCTCCT ACTATTCCTG TCCTGGCAAC AACTGCTACT
GCCAATAACC GTGTCGTTGC TGATATTCAG GTGCAATTAG GCGTGAACTT GCGGATTGTC
CGCGGACCTC TAGCGCGCAA CACGCTGCGT CTGCAAAACA TCGCGCTTGA CAGTCAGGCG
GAACGACTGG CGTGGCTTGC AGCACATATT CCCGACCTGC CGGGGAGCGG CGTTGTTTAC
ACACTGACCG TTCGTGATGC ACAGCGTGTG GCGTCCTGGC TGCAATCGTG CGGAATTGAT
GCGCATGCCT ACTGGGGAGA CCTCGATAGC CAGACTCGTG AGGATCTCGA GCAACGTCTG
CTGGAGAGTC GTATCAAGGT ATTGGTTGCA ACAACGGCGC TTGGCATGGG GTTCGATAAG
CCAGATCTCG GGTTTGTGGT TCATTTTCAG CGACCGGGAT CGGTCATTCA CTACTACCAG
CAGGTTGGAC GCGCCGGGCG CGCTATCGAT CAGGCATATG GCATTCTGTT GAGCGGCAAG
GAAGATCAGG ATATCACCGA ATACTTCATC ACGACCGCAT TTCCTCCACG AGACCACATT
GAGATGGTGT TGCACACGCT TGAGTCGGCA GACGAAGGTT TGACGATGGC GCAGATTGAA
AGTCGGGTCA ACCTCTCACG CAGTCAGATC GAAAAAACGC TTAAGATATT ATCGGTGGAA
ACGCCGTCCC CCGTTACCAA GATCGACAAC CGCTGGTTCG CAACGCCTGT CAACTACACG
ATCGATCTAC AAAGGATCGA GGACCTGACC ACTCTGCGGC GCGCTGAGCA GGAACGGATG
CGCGAATATG TTCATGCTAG CGAATGTCTG ATGGTCTTTC TCAAACGGGA ACTGGATGAT
CCCGATCTGC AGCCGTGTGG CCAGTGCGCT GTGTGTATCG GTCAACCGCT GGTATCGCCG
ACTTATCCTG AGGCGCTAGA GCGTCGGGCG GTTACTTTTT TGCAACGTCA TCACCAGCGT
ATCGAACCGC GTCGTATGTG GCCCGGCGAC GCATTGCAGG TTTATGGATG GCGTGGCAAA
ATATCACCAT CGTTAATGGC CGAGGAAGGA CGGGCATTGT GTATCTGGGG CGATGCTGGT
TGGGGCGAGT TGGTGAAACG TGGTAAGCAG ATCGATGGAC GCTTCGATAA TGCGCTTATT
GACGCTCTGG TCGAGTTGGT GCGTCAGCGC TGGCTTCCAG AACCGGCGCC AGGGTGGGTT
ACCTGTGTTC CATCGCTCAC GCACCCGACG CTGGTTGCGG ATATGGCGCA ACGTCTGGCG
CAGCGGCTGG GATTGCCCTT TGTGGCGGCA GTGCGCAAAG TTCGTCCGAC GGAACCTCAA
AAGCGCATGC AGAATGGTTT TCAACAGGCG CATAATATTG CGGGCGCTTT TGTCGTGGAT
CGCTGGAGCG GCATTGATGG CCCGGTTCTG CTGGTTGATG ACATGGTCGA CTCCGGGTGG
ACGTTTACGG TTGTCGCTGC ACTTTTGCGC GAAGCCGGCA GTGGACCGGT CTTTCCGCTG
GCGCTCGCAC TGGTGCAGGG ACATTGA
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| Protein sequence | MHALNEVLTL STSMPLRHYA EHLLKQALRN PSATFRDGQW EAIADLVERR ARLLVVQRTG
WGKSLVYFLA TRLLRERGSG PTLLISPLLA LMRNQLLIAE RVGVRAATIN SSNKNEWTNV
LSHLHAGGID MLLVAPERLA NDEFRSEALR PIADTISLFV VDEAHCISDW GHDFRPDYRR
IARVLQMLPP TIPVLATTAT ANNRVVADIQ VQLGVNLRIV RGPLARNTLR LQNIALDSQA
ERLAWLAAHI PDLPGSGVVY TLTVRDAQRV ASWLQSCGID AHAYWGDLDS QTREDLEQRL
LESRIKVLVA TTALGMGFDK PDLGFVVHFQ RPGSVIHYYQ QVGRAGRAID QAYGILLSGK
EDQDITEYFI TTAFPPRDHI EMVLHTLESA DEGLTMAQIE SRVNLSRSQI EKTLKILSVE
TPSPVTKIDN RWFATPVNYT IDLQRIEDLT TLRRAEQERM REYVHASECL MVFLKRELDD
PDLQPCGQCA VCIGQPLVSP TYPEALERRA VTFLQRHHQR IEPRRMWPGD ALQVYGWRGK
ISPSLMAEEG RALCIWGDAG WGELVKRGKQ IDGRFDNALI DALVELVRQR WLPEPAPGWV
TCVPSLTHPT LVADMAQRLA QRLGLPFVAA VRKVRPTEPQ KRMQNGFQQA HNIAGAFVVD
RWSGIDGPVL LVDDMVDSGW TFTVVAALLR EAGSGPVFPL ALALVQGH
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