| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2456 |
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| Symbol | |
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| ID | 5539937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3156193 |
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| End bp | 3157251 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640894586 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_001432554 |
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| Protein GI | 156742425 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAATA CTCGTTTAAG CGGAAGGCTT ATGGCAGTCA CACTTGCTGA TGTCGCCCGT
CGCGCCGGCG TTTCGCTGGC AACGGCGTCG CGTGTGCTCA ACGGCAGCGC GCGCGCCGTC
AGCGACGATA TGCGGGCGCG CGTCACCGCC GCCGCGCGCG AACTGAACTA TGTGCCGAAT
GCGCACGCAC AGGCGCTGGT TCGCGCCACC ACGCACACCG TTGGCGTGAT TGTGCACGAT
GTCAGCGACC CGTACTTTGC CGAGATTCTC CGTGGCATTC AGCGTAGCGC CGCCGACGCC
GGACGATTGA TGATCGTCTG CAACACGTTC CGCGAACCGC AACGGGAACT GGAATATGTC
CATCTATTGC AGATGCAGCG CGTCGAGGCG ATCATCCTGG CAGGCAGCGG TCTCGATGAT
CGCGCCTATT GCCGGGCATT GACCGAGAGT CTCGACTCGT TTGCGTCGCT TGGCGGGCGG
GTGGCGGTCA TCGGTCGTCA CAACATCGCT GCCGACGCGG TCGTTCCCGA TAATGTCGGC
GGGGCGCGGG CGCTAGCGCG CTACCTGTTC GACCTGGGGC ATCGCTCCTT CGGGGTGATC
GATGGTCCTT CCCTGCTGAC AACCAGCCGC GACCGGCGCA ACGGGTTCGT GCAAGCGCTT
ACAGCAAGCG GAATCGATCT GCCGCCTGAA GCGATTGTAT CGGGCGATTT TACGCGCGAT
GGCGGCGCTC GTGCGGCGAT TACGCTGCTG GAGCGTTTCC CATCAATCAC GGCGCTCTTT
GCTCTGAATG ACGTTATGGC AATCGGTGCG CTGGCCGCGC TGCGTGAACG TGGCATCGCG
GCGCCCGATC AGGTGTCGCT CGTCGGTTTC GATGATATTC CAATCGCCGC CGATGTCACT
CCGGCGTTGA CTACCGTGCG TGTGCCGATG AGTCAACTCG GCGCGGAAGC GTTGACGCTG
GCCCTCTCGA ATGAAGAGAC GCTGCGCACC GTCCATCTGC CGACCGAGAT CGTCGTCCGC
CAGAGTACGG CGCCGCCTTC TGCGGCGTCA TCAGGATAG
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| Protein sequence | MSNTRLSGRL MAVTLADVAR RAGVSLATAS RVLNGSARAV SDDMRARVTA AARELNYVPN
AHAQALVRAT THTVGVIVHD VSDPYFAEIL RGIQRSAADA GRLMIVCNTF REPQRELEYV
HLLQMQRVEA IILAGSGLDD RAYCRALTES LDSFASLGGR VAVIGRHNIA ADAVVPDNVG
GARALARYLF DLGHRSFGVI DGPSLLTTSR DRRNGFVQAL TASGIDLPPE AIVSGDFTRD
GGARAAITLL ERFPSITALF ALNDVMAIGA LAALRERGIA APDQVSLVGF DDIPIAADVT
PALTTVRVPM SQLGAEALTL ALSNEETLRT VHLPTEIVVR QSTAPPSAAS SG
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