| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2455 |
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| Symbol | |
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| ID | 5539936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3154966 |
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| End bp | 3156015 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894585 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001432553 |
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| Protein GI | 156742424 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.438242 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAGC ATGCGAGCGA TGCTCCGATC CTTCTGGAGG TTCGCAACCT CAAGAAGCAC
TTTCCCATCA AGCGCGGCTG GTTTTCGCGC ACCGTCGGGT ACGTTAGGGC GGTGGACGGC
GTCAGTTTCT TCGTGCGCGA GGGTGAAACT CTGGGTCTGG TCGGTGAAAG CGGTTGCGGC
AAGACGACCA CCGGGCGGCT GGTGTTGCGC GCGATGCCGC CGACCGAAGG CGACATCTGG
TTCCGTGATC GCGAGCAGGG TCGGGTCAAT ATTCCCGCCA TCGATTCCAG CGCCCTCAAA
CGGTTGCGCC GCAACATGCA GATGATCTTT CAGGACCCCT ACTCGTCGCT CAACCCGCGC
ATGACGTTAC TCGAGATCGT TGGCGAGCCG TTGCTGGTCC ATGGTGTGGC AAAGGGCGTC
GAATTGAAGG ATCGCGTTGC CGAAATGCTG CGCGTCGTCG GGTTGCGCAC CGAATACATG
AACCGCTACC CACACGCCTT TTCCGGCGGG CAGCGGCAGC GGATCGGCAT TGCCCGCGCG
CTGGCGCTCA ACCCGCAGTT GATCGTGTGT GATGAGCCGG TGTCGGCGCT CGATGTGTCG
ATTCAGGCGC AGATTCTGAA TCTGCTCCAG GATTTGCAGC AGCAGTTTCG CCTGACATAC
CTGTTTGTCG CACACGACCT GAGTGTGGTC GAGCATATTA GTGATCGCAT TGCGGTGATG
TATGTCGGCA AGATCGTCGA GAGCGCGCCG ACTCCCCGTC TCTACACTAT GCCACGCCAT
CCCTACACCG AGGCGTTGCT CTCCGCAGTG CCCAAGCCCG ATCCCCGCCG CCGCACCACG
CCAATCGTTC TGGAAGGTGA AGTGGCGGAT CCTGCCCATC CACCGCCAGG CTGCGCTTTC
CATCCTCGCT GCCGCTACCG GATCGAGCGG TGCGCGGTTG AAACACCGGA ATTGCGCGAG
ATTGCGCCCG ATCATTTCGT CAGTTGCCAT CGCGCCGAAG AACTGGCATT GCAGGGCGTT
GCGCCATTGA CGCGAGCGTT GGTCCATTGA
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| Protein sequence | MTEHASDAPI LLEVRNLKKH FPIKRGWFSR TVGYVRAVDG VSFFVREGET LGLVGESGCG
KTTTGRLVLR AMPPTEGDIW FRDREQGRVN IPAIDSSALK RLRRNMQMIF QDPYSSLNPR
MTLLEIVGEP LLVHGVAKGV ELKDRVAEML RVVGLRTEYM NRYPHAFSGG QRQRIGIARA
LALNPQLIVC DEPVSALDVS IQAQILNLLQ DLQQQFRLTY LFVAHDLSVV EHISDRIAVM
YVGKIVESAP TPRLYTMPRH PYTEALLSAV PKPDPRRRTT PIVLEGEVAD PAHPPPGCAF
HPRCRYRIER CAVETPELRE IAPDHFVSCH RAEELALQGV APLTRALVH
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