| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2452 |
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| Symbol | |
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| ID | 5539933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3150468 |
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| End bp | 3151631 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640894582 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001432550 |
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| Protein GI | 156742421 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.219738 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGACTG AAGGGAGTAT TGAGCGAACC CGTGCCGAGG ATGCCGACGT TGCAACCGTC
GGCAATCGCA CAGAACAGAT TTATGTGGCG CCACAGTGGA AGTTGATGTG GTGGAAGTTT
CGCAAGCATC GCATGGCGAT GGTGAGCGGC GTGGTGTTGA TTTTCCTCTA TCTGATTGCC
ATCTTTTGCG AATTTGTCGC CCCTTACGAC CCGGAGAGTT TTTCGACGCG CTATACGCTG
GCGCCGCCGT CGCGTATTCA TTTCTTCGAT ACAGAAGGAA ATTTTCGCGG TCCTTTTATC
TATGGAATGA AACGTGAACG TGACCCGGTG ACTCTTCGAC CGATCTTTGT TGAAGACACC
AGTGACATCC ATCCTATTCG CCTGTTCTCT CCCGGTCAAC CGTACAAACT GTGGGGAATC
TTCGAGTCAA ACATCCGACT GTTTGGCATC GATGCGCCGA TCGAAGAGCA TGCATTTTTT
CTCCTGGGCG CCGATCGTTT GGGACGCGAC CTGTTTTCGC GGATTGTCTA TGGTGCGCGC
ATTTCGCTCT CTATCGGGCT GGTCGGGGTC TTCTTGAGCC TGATCCTCGG TATTGTGCTC
GGCGGCATTT CCGGCTACTA TGGCGGCGTG GTCGATACCA TCATTCAGCG CGTAATCGAG
TTCATTCGGT CGATCCCCGC CATTCCGCTC TGGATGGGAC TCAGCGCAGC GCTTCCGGCA
GACTGGCCCG TGGTATGGGT CTATTTCGGC ATTACGGTCA TTCTGTCGTT GATCGGTTGG
ACTGGACTGG CGCGAGTGGT GCGCGGTCGC TTCCTGGCGT TGCGTGAAGA GGATTTCGTG
CTTGCGGCGC GCCTGGTCGG TTCGAGCGAA ATGCGCATCA TTCTGCGCCA CATGGTTCCG
TCGTTCCTGA GTTATATCAT TGCGACGCTG ACGCTGGCGG TGCCGGGCGT GATCCTGGCG
GAAACCGGGT TGAGTTTCAT CGGGCTGGGG TTGCGCGCCC CGGCGATCAG TTGGGGTGTG
TTGCTTCAGG AGGCGCAAAA TCTGCGCTCG GTCGCGCTGG CGCCCTGGGT CTTGCTTCCC
GGCGCGGCTG TGGTGATCTC GATCCTGAGT TTCAATTTTC TGGGAGACGG GTTGCGCGAT
GCTGCCGATC CGTATGAGCG TTGA
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| Protein sequence | MATEGSIERT RAEDADVATV GNRTEQIYVA PQWKLMWWKF RKHRMAMVSG VVLIFLYLIA
IFCEFVAPYD PESFSTRYTL APPSRIHFFD TEGNFRGPFI YGMKRERDPV TLRPIFVEDT
SDIHPIRLFS PGQPYKLWGI FESNIRLFGI DAPIEEHAFF LLGADRLGRD LFSRIVYGAR
ISLSIGLVGV FLSLILGIVL GGISGYYGGV VDTIIQRVIE FIRSIPAIPL WMGLSAALPA
DWPVVWVYFG ITVILSLIGW TGLARVVRGR FLALREEDFV LAARLVGSSE MRIILRHMVP
SFLSYIIATL TLAVPGVILA ETGLSFIGLG LRAPAISWGV LLQEAQNLRS VALAPWVLLP
GAAVVISILS FNFLGDGLRD AADPYER
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