| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2439 |
|---|
| Symbol | |
|---|
| ID | 5539920 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 3134247 |
|---|
| End bp | 3135098 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640894569 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001432537 |
|---|
| Protein GI | 156742408 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3375] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.526022 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.318153 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATTG TGTACCGCCG CATCGAAACA CACGACGAAT ACCGCGCCGT TGAGGACCTT
CAGGCGCAGG TGTGGGGCAG CGATGCGCGC GATATTGTCC CACTCCATCT CCTGCTGACT
GCCGGCAAAA ACGGTGGTCT GACGCTTGGT GCGTTCGACA CCGACCTGAC GCCGCCGGAT
GATCTGGTCG GGTTCGTGTT CGGTTTTGTC GGTCTCACAG CGACCGGTCA GATGAAGCAC
TGCTCGCATA TGCTTGGCGT ACTGCCGCGT TACCGCGATC GTGGCATCGG CGAAGAACTG
AAGCGGCGCC AACGCGACTG CGTCTTGGCG CAAGGCATCA CGCTGATGTC CTGGACCTTC
GATCCGCTGC AAAGCCGCAA TGCGCGGCTC AACATTCGGA AACTCGGCGC GGTCTGTCGT
ACTTATGCGC GTGATCTGTA CGGGGCGATG AGCGACCGGC TGAATGCCGG CATTCCCAGT
GATCGTTTCG AGGTCGAGTG GCATCTGGCA TCACGCCATG TCGAGCGGCG CCTGGCGCGC
GCCGAACCGG CGCCATCGTT CGCCGCGCTC ATTGCTCAGG AGATTCCGGT GCTGAACGAA
GCGCCTCCTG GCGCCGTCGC CGATGCACCG GCGAGCATCT GTCGCGCGCC ATCTGGCGAC
TGTGTGCTCA TTCGCTTTCC GACCGACATT CAGGCGATCA GGCACATGCG CCCGGCAGAG
GCGCTGACCT GGCGCATGCA GTTGCGCGAC CTGTGCGAAG CTGCCTTTGC CGGCGGGTAT
ACGGCGGTTG ATGTTCTTTC CGAGGGTGCG TGCAGTTACT ACCTGCTGCG CCAGCACTGG
AGCGTTGTAT GA
|
|---|
| Protein sequence | MPIVYRRIET HDEYRAVEDL QAQVWGSDAR DIVPLHLLLT AGKNGGLTLG AFDTDLTPPD
DLVGFVFGFV GLTATGQMKH CSHMLGVLPR YRDRGIGEEL KRRQRDCVLA QGITLMSWTF
DPLQSRNARL NIRKLGAVCR TYARDLYGAM SDRLNAGIPS DRFEVEWHLA SRHVERRLAR
AEPAPSFAAL IAQEIPVLNE APPGAVADAP ASICRAPSGD CVLIRFPTDI QAIRHMRPAE
ALTWRMQLRD LCEAAFAGGY TAVDVLSEGA CSYYLLRQHW SVV
|
|---|
| |