| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2438 |
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| Symbol | |
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| ID | 5539919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3133138 |
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| End bp | 3134250 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640894568 |
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| Product | mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_001432536 |
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| Protein GI | 156742407 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR01928] o-succinylbenzoic acid (OSB) synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.502974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.215432 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCG AGTCGATCAC ATTGCACCAC ATCGACATGC CGCTGGTTGC GCCCTTCGAG
ACGAGTTTCG GGCGCGAAAC GCACCGTCCA TGCATTCTGA TCGAAATGCG CGCCGACGGA
TTAACCGGAT GGGGCGAATG TGTTGCCGGC GCGGGTCCCT GGTATGCGTA TGAGACCATA
GGAACCGCCT GGCACATCAT CAGCGACTTC CTCGCGCCCA TGATCGTCGG GCAAGAGATC
ACCGAACCGA TAGGGATCGT CGAACGCTTC GCGTCGGTGC GCGGGCATCC CATGGCGCGC
GCCGCCGTCG AAGCCGCTTT CTGGGATCTC TATGCGCAAG CGCGCGGTGT CTCACTGGCG
CGTCTCATCG GCGCTACCCG TGATCGTGTG ACAGTTGGCG TCAGTGTAGG CATCGAGTTA
ACGCTCGAGG CGCAACTGGC GAGCATCGAG CGGTTTGTTG CAGCCGGGTA TGCGCGCATC
AAACTGAAGA TCAAGCCAGG ATGGGACGTT GCCGTGGTGC GCGCAGTGCG CGAACGCTGG
CCCGATATTG CATTGCAGGT GGACGCCAAC TCGGCGTACA CCCCGGACGA TGCACCGATC
TTTCGTGAAT TGGACGAGAT GAACCTGTTG TTGATCGAAC AGCCGCTCCA CCACGACGAT
ATTGTGGACC ACGCGCGATT ACAAGCGCAA ATAAGCACAC CCATCTGCCT GGACGAGAGC
ATTCACTCCC CAGAGCACGC GCGTTGGGCG CTCGACATCG ACGCCTGCCG GGTGATCAAC
ATTAAGATCG GGCGGGTCGG CGGGCTGACT GCCGCGCGCC AGATCCACGA CCTGTGCGCC
GAACGCGGCG TGCCGGTCTG GTGCGGCGGC ATGCTGGAAA CCAACGTCGG GCGCGCGGTC
AACCTGGCGC TGGCGGCGCT CCCCAACTTC GCGCTACCCG GCGACATCTC AGCATCGGCG
CGTTATTATC ACCGCGACAT CGCCGCGCCC GATTTCGTGC TGAACGACGA CTCGACGATC
ACCGTGCCCG ATACACCGGG CACAGGCGTC GCCGTGCTGC CGGAGCGCCT GCGCGACGTG
CAGGTGCGTG AGGTGATCAT TGGGAAAGGA TGA
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| Protein sequence | MKIESITLHH IDMPLVAPFE TSFGRETHRP CILIEMRADG LTGWGECVAG AGPWYAYETI
GTAWHIISDF LAPMIVGQEI TEPIGIVERF ASVRGHPMAR AAVEAAFWDL YAQARGVSLA
RLIGATRDRV TVGVSVGIEL TLEAQLASIE RFVAAGYARI KLKIKPGWDV AVVRAVRERW
PDIALQVDAN SAYTPDDAPI FRELDEMNLL LIEQPLHHDD IVDHARLQAQ ISTPICLDES
IHSPEHARWA LDIDACRVIN IKIGRVGGLT AARQIHDLCA ERGVPVWCGG MLETNVGRAV
NLALAALPNF ALPGDISASA RYYHRDIAAP DFVLNDDSTI TVPDTPGTGV AVLPERLRDV
QVREVIIGKG
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