Gene Rcas_2431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2431 
Symbol 
ID5539912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3125935 
End bp3126435 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content57% 
IMG OID640894561 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_001432529 
Protein GI156742400 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.164019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.169541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGCA CCACCGTGTA CATTGGGCTT GGCAGCAATC TCGGCGATCG CGTTGCGCGA 
TTGCGCGAAG CGGTTGAGCG TTTAAGCCGG ATCATCGACG TGACTCGCGT CTCGCACTTG
TATGTCCATG CGCCGCCTGG CTATGTCAGC GATGATGCAT TTATCAATGC CGTCCTCGAG
GGGCATACCA CGCTCAAGCC ACTGGAACTC CTTGCCGAAC TTCAGAAGAT CGAGCGCGCA
ATGGGGCGGC GTCGAGGCAT TCAGTACGGT CCGCGTCCTA TCGATCTTGA TATTCTCCTT
TACAGCACAG TGCAGATGGA GTCGCTCGAA CTGACCATCC CGCATCCGCG CCTGGCTGAA
CGCGCATTCG TCCTGAAGCC GCTGGCTGAA ATTGCGCCCA ATCTGATGCA TCCTGTGCTG
TACTACACCA TCACGCAGTT ACTATCCGAT GTTGACGATG CCGATCAGGT CAGATTGTTC
AATCCAGGCG GCAACCGCTA G
 
Protein sequence
MRSTTVYIGL GSNLGDRVAR LREAVERLSR IIDVTRVSHL YVHAPPGYVS DDAFINAVLE 
GHTTLKPLEL LAELQKIERA MGRRRGIQYG PRPIDLDILL YSTVQMESLE LTIPHPRLAE
RAFVLKPLAE IAPNLMHPVL YYTITQLLSD VDDADQVRLF NPGGNR