| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2429 |
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| Symbol | prfA |
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| ID | 5539910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3123367 |
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| End bp | 3124461 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640894559 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_001432527 |
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| Protein GI | 156742398 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0447766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0852947 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCTG CTCTGATCGA CAAACTTGCC AGCATCACGG CGCGTTACGA TGAACTGCTC
GATCTGATGG CGCAACCCGA TGTTGCGACC GATCCGGTGC GGTTGCAGCG GTATGCGCGT
GAGCAGCGCG AACTTGAACC GCTTGTCGAG GCATATCGCG CGTACCGTGA TGTGGAGCGT
CAGATTGAGG ATACGTCGTT CCTGCTGGAA CACGAGACCG ACCAGGACGT GCGCCAATTG
GCGCAGGACG AACTCGATCA TCTGCTGGAG CGGCGTGCGC AACTCGAGCA GCAAATCAAG
GTCTTATTGC TCCCGCGCGA CCCGAATGAC TCGAAGAATG CGATTATGGA ATTGCGGCAG
GGTGAGGGCG GCGATGAAGC GGCGTTGTTT GCCGCCGACC TGTTCCGCAT GTATACGCGC
TACGCCGAGC AGCGCGGCTG GGATATCGAA GTGATCAGCG CCACCGAAAA CGGGCCGGGC
GGCTATAAAG AGATTATTTT TGAGGTCAGG GGCGAAGGCG CATACAGCCG CCTCAAGTAC
GAAGGTGGCG TTCATCGCGT GCAGCGCGTG CCGGCCACGG AAGCGCGCGG GCGGATCCAT
ACTTCGACGG CGACCGTGGC GGTGCTGCCC GAAGTCGAAG AGACCGACAT CGAGTTGAAC
CCGTCCGACT ACCGGGTTGA TGTGTTCCGT TCGGGAGGGC ATGGCGGGCA GGGCGTCAAC
ACGACCGACT CGGCCGTGCG GATTGTCTAT AAGCCCGGCA CGCCGGAAGA AATTGTTGTC
ACCTGCCAGG ATAGCCGTTC GCAGTTGAAG AACAAGGCAT CGGCGCTGGC AGTTTTGCGC
GCGCGTCTCT ATGCTCGCGA AGAAGAGAAG CGCCGCAAAG AGTTGGGCGA GACACGTCTG
GCGCAGGTCG GCGCCGGTGA ACGCGCCGAG AAGATTCGCA CCTACAACTT TCCTCAGGAC
CGGGTGACCG ACCATCGTAT CGGACAGAAC TTCTCTAATC TTCCGGGTAT TCTTGATGGC
GATCTCGACC GTCTGATCGA TATGCTGATC ATTGCCGACA ACGCCGAGCG TCTCGAGTCC
GTCGCAGCCC GGTAA
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| Protein sequence | MAAALIDKLA SITARYDELL DLMAQPDVAT DPVRLQRYAR EQRELEPLVE AYRAYRDVER
QIEDTSFLLE HETDQDVRQL AQDELDHLLE RRAQLEQQIK VLLLPRDPND SKNAIMELRQ
GEGGDEAALF AADLFRMYTR YAEQRGWDIE VISATENGPG GYKEIIFEVR GEGAYSRLKY
EGGVHRVQRV PATEARGRIH TSTATVAVLP EVEETDIELN PSDYRVDVFR SGGHGGQGVN
TTDSAVRIVY KPGTPEEIVV TCQDSRSQLK NKASALAVLR ARLYAREEEK RRKELGETRL
AQVGAGERAE KIRTYNFPQD RVTDHRIGQN FSNLPGILDG DLDRLIDMLI IADNAERLES
VAAR
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