| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2421 |
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| Symbol | |
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| ID | 5539902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3114182 |
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| End bp | 3115231 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640894551 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001432519 |
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| Protein GI | 156742390 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAATG TAGCGACAGG GACCGGAGCG GCGGCGACCG GCGTCCAGAT TGTCAGTGAA
GATGATGTCG TGCGCGTTGA AGATCTGCGG CTCAGTTTCT ACACCACGCT CGGCGTTGTG
CGCGCACTCA ACGGTGTTTC GTTCAACATC CCGCGCGGCA AGGTGCTCGG CGTGGTCGGC
GAGTCGGGAT GCGGTAAAAG TCAGACCGGG TTGTCGATTA TGCAATTGAC TCCTGGACGG
ATCGAAGGTG GGCGCATTCT CTTCCGTGAG TTCAACACCA GTGATGTGAT CGACATCACT
AAACTCGAGA AAAACGGTCC TGAGATGCGC AAAATCCGCG GCAACCATAT CTCGATGATC
TTCCAGGAGC CAATGACCTC GCTCAATCCG TGTTATACAG TCGGTCATCA GATCGAGGAA
GCCATTTTGC TGCATCAGAC GCAGGATAAA GCCGAGGCGC GCCGCCGCGC CGTCGATATT
CTGCGTAAGG TCGGTATGCC CAATCCCGAA CGCATTGCCG ACAGTTACCC GCATCAATTG
TCCGGCGGGA TGCGCCAGCG CGCGATGATT GCGATGGCGC TCTCCTGCAA CCCAACCCTG
CTCATCGCCG ATGAGCCGAC AACCGCGCTC GATGTGACCA CCGAGGCGCA AATTCTCGAT
CTGATGCGCG ACCTGCAACA CGAGATCGGC ACCTCAATCA TGTTTATCAC CCACAATATG
GGGGTTGTTG CGCAGATGTG CGATGAGGTT GCGGTGATGT ATCTTGGTCG GATCATTGAA
CGCGCAGCCG TTGATGATAT TTTCTACGAT CCAAAGCATC CGTACACGAT CTCGCTGCTG
CGTTCGATCC CGCGCCTCGG TGTTGCTCGC GGTCAGAAAC TCGAGTCGAT CAAGGGCACG
GTGCCCGACC CGTATTCGAC CGTGCCCGGC TGTCCGTTCC ATCCGCGCTG CCCGGCGGCT
ATCCCTGGTC TGTGCGATAC GGTGATGCCG GATGAGATGT TCGTTGCCGG TTCGCGCACC
CACACGGTTC GTTGCCATCT GTATACGTAG
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| Protein sequence | MTNVATGTGA AATGVQIVSE DDVVRVEDLR LSFYTTLGVV RALNGVSFNI PRGKVLGVVG
ESGCGKSQTG LSIMQLTPGR IEGGRILFRE FNTSDVIDIT KLEKNGPEMR KIRGNHISMI
FQEPMTSLNP CYTVGHQIEE AILLHQTQDK AEARRRAVDI LRKVGMPNPE RIADSYPHQL
SGGMRQRAMI AMALSCNPTL LIADEPTTAL DVTTEAQILD LMRDLQHEIG TSIMFITHNM
GVVAQMCDEV AVMYLGRIIE RAAVDDIFYD PKHPYTISLL RSIPRLGVAR GQKLESIKGT
VPDPYSTVPG CPFHPRCPAA IPGLCDTVMP DEMFVAGSRT HTVRCHLYT
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