| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2406 |
|---|
| Symbol | |
|---|
| ID | 5539887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 3099583 |
|---|
| End bp | 3101037 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640894536 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_001432504 |
|---|
| Protein GI | 156742375 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCCC CTTCATTTCA TGTGCAACAC TATATCGGCG GCGCATTTGT CGAAGGAACG
CGCCGTTTCG AGATTTTCTA CCCGGCGACG AATGAGATCA TCGGCACTGC GCCGGAGGGT
CGCGCAGAGG AAGTCGATGC CGCAGTACAG GCGGCGACAC ACGCCTTCGC CGCGTGGAGT
CGCGCCGGCG CTGCCGAACG GCGCCGGGTG CTGAAGGCGT TCGCCGATGC AATTCGCGCG
CACGCTGAAG ACCTCGAACG GATCGAGACG TGGGATGTCG GCAGACCAAT CCGCGAGAAC
CGCGCCGGGT ATGTGCAGCG TCTCGCCGCC AACATTGAGT TCTTCGCCGA TTTTGCCGTG
ACCCATGGCA GCGAAGCCTA TCCCATGGAC AGCGGCTACA TCAATTATGT GCTGCGCCAG
CCGGTTGGCG TGGCGGCGCT GATCACTCCC TGGAATGTAC CAATGCTCCA GGCAACGTGG
AAGATCGGTC CGGCGCTCGC CTTTGGCAAC ACGGTCGTCC TCAAACCCGC CGAATTGACG
CCGATCGGGG CGTGGAAACT GGCACAGATC GCGCACAGCG CCGGTCTGCC GCCGGGGGTG
CTCAACGTTG TCCACGGGTT TGGTCCTGAG TCGGCAGGCG CGTTGCTGAC GCAGCACCCC
GGCGTGCAGT TGATTTCGTT CACCGGCGAG AGCACGACCG GCAAAATCAT CATGGGCGCG
GCATCGCACA CCCTCAAGCG CTTGTCGTTC GAGTTGGGCG GCAAGGGCGC CAACATCATT
TTCGCCGACG CCGACCTGGA TCGCGCCGTG GCGATCAGCC TGCGCTCTTC CTTTTTCAAC
CAGGGAGAGT TCTGCCTTGC CGGTCCACGG CTGCTGGTCG AGCGCCCGAT CTACGACGAG
TTCTTGCAGC GGTTCATCGC CGCCACGCAG CAGTTGCGCG TCGGCGATCC GATGGATCCG
GAGACGACCG TGGGGGCGTT GATTGCGCCG GAGCATCTCC AGCGCGTGCG CAGTTACATC
GACATTGCGC GTGGCACGCA AGCAGAAATC GTCCTCGGCG GCGATCAGCC CGACCTGCCG
GCGCCATTCA ATCGCGGCAA TTTCCTCAAC CCGACGATCA TCGTCGGCGT TCAGCCGCAG
GATCGCGTCT GCCAGGAAGA AATCTTCGGT CCAGTTGTGA CGGTGGCGCC GTTCGACGGC
GAGGAGGAGG CGCTTGCGAT TGCCAACGGC GTCGCGTATG GTCTCTCGGC GGTCGTGCAG
ACGCGCAACC TGGGACGCGC CGTGCGGGTT GCCGGCGCCA TCGACGCTGG CACCGTCTGG
ATCAACGATT TCTTCGTGCG CGACCTGCGC GTGCCATTCG GCGGCATGAA GCAGAGCGGC
ATTGGGCGCG AAGGCGGGCA CTACAGCCTT GAGTTTTTCA CGGAGGCGAA GACGGTATGC
CTGAGCAACC AGTAG
|
|---|
| Protein sequence | MQSPSFHVQH YIGGAFVEGT RRFEIFYPAT NEIIGTAPEG RAEEVDAAVQ AATHAFAAWS
RAGAAERRRV LKAFADAIRA HAEDLERIET WDVGRPIREN RAGYVQRLAA NIEFFADFAV
THGSEAYPMD SGYINYVLRQ PVGVAALITP WNVPMLQATW KIGPALAFGN TVVLKPAELT
PIGAWKLAQI AHSAGLPPGV LNVVHGFGPE SAGALLTQHP GVQLISFTGE STTGKIIMGA
ASHTLKRLSF ELGGKGANII FADADLDRAV AISLRSSFFN QGEFCLAGPR LLVERPIYDE
FLQRFIAATQ QLRVGDPMDP ETTVGALIAP EHLQRVRSYI DIARGTQAEI VLGGDQPDLP
APFNRGNFLN PTIIVGVQPQ DRVCQEEIFG PVVTVAPFDG EEEALAIANG VAYGLSAVVQ
TRNLGRAVRV AGAIDAGTVW INDFFVRDLR VPFGGMKQSG IGREGGHYSL EFFTEAKTVC
LSNQ
|
|---|
| |