Gene Rcas_2395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2395 
Symbol 
ID5539876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3085550 
End bp3087067 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content65% 
IMG OID640894527 
ProductFHA domain-containing protein 
Protein accessionYP_001432495 
Protein GI156742366 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAACAT GTCCAACGTG CGGCGCTCTG AATGATCCGG TGAACCGTTT CTGTGAGCAG 
TGCGGCGCAC GGCTCGAACC CAGCGGTCCG GTTCCATCCG TTGCGCCGCC TGCCGCAACC
GGTCAGACCT GCCCGAACTG CGGCGCTCAT GTGCTTCCTG GCCAGGCGTT CTGCGAGGAG
TGCGGCACAG CGCTGACGGC TACACCGCCG CCTCTCGGCT CAGGTGCGTC ACCGGCTGGT
TTCGACGCAC CAACCATGAT GGCGCCAGCG CCAGCGATGC CGGTTGCTGG CTCGATCTGC
CCCGCATGCG GACACCAGAC GATGCCGGGG GATCGGTTCT GCGATTCATG CGGTGCAGCG
CTGGCGCCCG CGTCTTCCCC GTCGATTGCT GATGTGCCCA CTGCTGCTGT GCCTGAACCG
CTCTGGACTG CTCCTGCGCC TTCGGTAGCG CCATCAGCGG CTGGTGAGCC TCCCATGCCA
ACGCTGATCG AAGCGGCGCC TCCGCTGCCT GCTGCGCCAG CCGCCCCCGT TGAATCGCCA
GCGCCTGTGG TGAGCGAAGC AGTCGTTGTA CCGGTCGAAT CTCCACCGCC GTCTGCTCCC
GCCGCTCCGG CACTCGATGC GCAGGCGGAG TACGAAGCGA AACGCCAGGC GCTGCTCGAT
GAGATCGCGC GCCAGGATCA GATCATTGCG CAACTCGAAC AGATGCAGGC GACGTTTGGC
GCGGCAACGC CCCATGCCAT CACGCTGGCG CTGGATGAAG CGCGGAATGC ACGGGCAAAG
GCGCAGAAAG AACTCGATGC GCTGCAACCG CCTCCGCCGC CTGTTGATCC GGCAGTCGTC
GCTGCGCTCA ACGATGAAAT TGCCAGACAG CAGCAGATCA TTGCGCAACT CGAACAGATG
CAGGCGACGT TTGGCGCGGC AACGCCCCAT GCCATCACGC TGGCGCTGGA TGAAGCGCGG
AATGCACTGG CAAAAGCGCG GGAGGAACTG GCATCGCTCG GCATTGCTGC GCCTGCCGCC
ATTGCGCCCG CGCCGGAAGC GCCGCCGCAG ATCGCAGCCG AACCCGTCGT ACCGCCGGCG
CCCGTTGTCG AACCGGTGGC GCCCCCTGTT GCGCATCGGG TTGAACCGGT GGCGCCGCTT
CCCTTTGCTG CACCGGCCAC GCCTGATACA GCAGTGACGG TCACCTCCCC GCCGACCGGT
CCACGCCTGG TGTTCGACAA CGGACAGGGA GAAATTGCTG TGCCTGTGGA TAAAGCGGAG
ATCACAATTG GGCGCGAAGA CCCGATCAGC GGTATTCACC CGGAGATCGA CCTGACACCC
TTCGGCGGCG AGAGTGGCGG CGTGAGTCGC CAGCATGCGC GCCTGATCCA TAGCGGCGGG
CAGTGGTCGA TTGTCGATCT GGGCAGCACA AACTACACCC GAGTGGACGG TCTACGGATC
GAGCCGGGTG CGCCGCATCC GCTGAAGGAC GGTGCGCGCC TGCAATTCGG GCGCCTGACA
GTGACATTCA GGATGTAA
 
Protein sequence
MITCPTCGAL NDPVNRFCEQ CGARLEPSGP VPSVAPPAAT GQTCPNCGAH VLPGQAFCEE 
CGTALTATPP PLGSGASPAG FDAPTMMAPA PAMPVAGSIC PACGHQTMPG DRFCDSCGAA
LAPASSPSIA DVPTAAVPEP LWTAPAPSVA PSAAGEPPMP TLIEAAPPLP AAPAAPVESP
APVVSEAVVV PVESPPPSAP AAPALDAQAE YEAKRQALLD EIARQDQIIA QLEQMQATFG
AATPHAITLA LDEARNARAK AQKELDALQP PPPPVDPAVV AALNDEIARQ QQIIAQLEQM
QATFGAATPH AITLALDEAR NALAKAREEL ASLGIAAPAA IAPAPEAPPQ IAAEPVVPPA
PVVEPVAPPV AHRVEPVAPL PFAAPATPDT AVTVTSPPTG PRLVFDNGQG EIAVPVDKAE
ITIGREDPIS GIHPEIDLTP FGGESGGVSR QHARLIHSGG QWSIVDLGST NYTRVDGLRI
EPGAPHPLKD GARLQFGRLT VTFRM