Gene Rcas_2380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2380 
Symbol 
ID5539861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand- 
Start bp3069420 
End bp3069965 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content66% 
IMG OID640894512 
Producthypothetical protein 
Protein accessionYP_001432480 
Protein GI156742351 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.402692 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAC TGGCAACGAG CGACATTCCC CAGGCAGATG TGTTGTGGCA TGTGGCGCGA 
GTGCCGGAGG CGATCATACG CGGACACACG ACGCACGAGG CGATCGGCGC CTACCTTGGC 
GCCAAGGGGC AGCGGCAGGG ACTGTACTAT GCCCAGGCAG CACGTGTGCT CGGCCTGGTT 
GGTGAGCCAG AGGCGGATGG GACGGTTCCG CTGACGCCTT ATGGTCGAGC ATTCGCCCAG 
TATGACCGTT CTGCACAGAG CACCGCATTG CGCCGTCTGT TGCGCGAACA GGAGCCGACC 
CGATCGGTTC TACGCGCCAT TCGTGAACGC GGCGGCATCG ATTACAACGG CATTGCCGGC 
GTGCTGCGCC GGCTGGCGCC GCTTGCAGAA AGCACAGCAC GACGGCGGGC GCACACCGCT 
GCCGCCTGGC TGATCGCCGC CGGTCTCGCC GCCTGGCGCG ACGGAAAACT CGTTGCGGTC 
AGCGCACCGT CTGAGCGCAT GGGATGGGCA GTGGTGCGGC GCCGGATGGA CAGCGCCGCA 
CGGTAA
 
Protein sequence
MNTLATSDIP QADVLWHVAR VPEAIIRGHT THEAIGAYLG AKGQRQGLYY AQAARVLGLV 
GEPEADGTVP LTPYGRAFAQ YDRSAQSTAL RRLLREQEPT RSVLRAIRER GGIDYNGIAG 
VLRRLAPLAE STARRRAHTA AAWLIAAGLA AWRDGKLVAV SAPSERMGWA VVRRRMDSAA 
R