Gene Rcas_2368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2368 
Symbol 
ID5539849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3053811 
End bp3054239 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content66% 
IMG OID640894500 
Producthypothetical protein 
Protein accessionYP_001432468 
Protein GI156742339 
COG category[S] Function unknown 
COG ID[COG2947] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.864843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.24311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAC GTTTCTGGTT GCTGAAAACG GAGCCGGATT GCTACGCCTG GAGCGATCTG 
GTGCGCGATG GGCGGACGGT TTGGGACGGG GTGGCGAACA ATGTCGCGCT CAAGCATCTG
CGTGAGATGC AACCGGGGGA CGAAGCGCTG ATCTACCACA CCGGCGACGA GCGACGCGCC
GTTGGGCGGG CGGAAGTGAT CAGCACGCCG TATCCCGACC CTCACCAGAG CGATCCACGT
CTGATCGTCG TAGATGTGCG CCCGCTGGCG CCGTTGCCGC GCCCGGTAGC GCTGGCGGAC
ATCAAAGCCG ACCCGGCGTT CGCCGACTTT GCGCTGGTGC GCCAGTCGCG TCTTTCGGTT
GTGCCGGTGA CCGAGGCGCA GTGGCAGCGC CTGCTGGCGA TGGCAGGCGT CGCCAGCAGT
GCGGAGTGA
 
Protein sequence
MSKRFWLLKT EPDCYAWSDL VRDGRTVWDG VANNVALKHL REMQPGDEAL IYHTGDERRA 
VGRAEVISTP YPDPHQSDPR LIVVDVRPLA PLPRPVALAD IKADPAFADF ALVRQSRLSV
VPVTEAQWQR LLAMAGVASS AE