Gene Rcas_2363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2363 
Symbol 
ID5539844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3049633 
End bp3050049 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content65% 
IMG OID640894495 
Productcytochrome c class I 
Protein accessionYP_001432463 
Protein GI156742334 
COG category[C] Energy production and conversion 
COG ID[COG3474] Cytochrome c2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.217557 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCAT TGATTCGGAT GACCATCGGA GTTGCCCTGG TGCTCGGCGC GCTGCTGCTG 
GCGGCGAATA CGCTCGGCAG ACCTCCCGCC GCGCCCGCGA GCGGACCGAT TGCCGGTGAT
GCAACGCGCG GGCAGATTGT CTTCGAGCGC GCCGGGTGCA GCGCCTGCCA TACGACGACC
ACCGAATTTC GGGTTGGAAC GGGGATGGCA GGCGTGCTGC AACCGGAAGG ACCGGTCTAT
CCGCCGGGGG TGAACTATGG CGGTTTGCTG CCCAACGGCG CGCCGCGCAC TGAAGAGAAC
GTCGCCGCCT TCATTCGCGC GACCAACCAG GGACAGATCG GCATCATGCC CGGACGCGCC
CTGAGTGACC AGCAGATGGC TGATTTAATC GCCTATCTGC GCACGCTGAC GCGCTAA
 
Protein sequence
MQPLIRMTIG VALVLGALLL AANTLGRPPA APASGPIAGD ATRGQIVFER AGCSACHTTT 
TEFRVGTGMA GVLQPEGPVY PPGVNYGGLL PNGAPRTEEN VAAFIRATNQ GQIGIMPGRA
LSDQQMADLI AYLRTLTR