Gene Rcas_2355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2355 
Symbol 
ID5539836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3037144 
End bp3037746 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content60% 
IMG OID640894488 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001432456 
Protein GI156742327 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.382681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.10625 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACAA ACCAAACCGA TGGCGGCCGC CGCCCCGAAG TCGTTCCGGG TGACCGAATC 
TTCCTCAGCG TGCTGCAACG CAGCGATCTG CTCCTCTTCG CGCGCTGGTT CAGCGACCTG
GAACTGACCT TGTACGTGGG ACAGCCAGGC ATGGCAAACA CGCTGGAGCA GGAAGAGGAG
TGGTATGAGC GTGCCGCGCG CCAACGCGAC GCCAAAACAT TTGCGATCAT TGTGCGCGAT
GGTCAGCAGA TGATCGGCAC GGTCAGCCTG ACCGACATCG ACCAGCGCCG CCAGCGCGCC
GCATTGGGGA TCGCCATTGG CGACAAAGGC GCCTGGAACA AAGGGTATGG GAGCGAGGCG
GTTCGGCTGA TGTGCGCCTA CGGGTTCGCC TTCCTGAACC TCTACACGGT CTACTTGTGG
GTTCTGGGAT ACAACCTGCG CGCGCATCAG GCGTATCTCA AGTCCGGGTT TCGTGAGGTG
GGTCGGCTGC GCGGCGGCAT CCTCTTCGAC GGTCGGCGCT ACGAGGACAT CTTGATGGAA
ATTACCCGTG ATGAGTTTGG TCCATCAAAC CTGACTCATC TGATTCAGCA GATAGCGAGT
TGA
 
Protein sequence
METNQTDGGR RPEVVPGDRI FLSVLQRSDL LLFARWFSDL ELTLYVGQPG MANTLEQEEE 
WYERAARQRD AKTFAIIVRD GQQMIGTVSL TDIDQRRQRA ALGIAIGDKG AWNKGYGSEA
VRLMCAYGFA FLNLYTVYLW VLGYNLRAHQ AYLKSGFREV GRLRGGILFD GRRYEDILME
ITRDEFGPSN LTHLIQQIAS