| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2353 |
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| Symbol | |
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| ID | 5539834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3035121 |
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| End bp | 3036050 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894486 |
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| Product | ABC transporter related |
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| Protein accession | YP_001432454 |
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| Protein GI | 156742325 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.341379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.122242 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCGC CGGATATTCA GCGCCTCGCA GCGCGCACCG ATGTCGCGCT CGAAGTGCAG
AATGCGGTGA AACGCTTCGG GCGCGAAACG GCGCAGCAAC AACCGTTCTG GAAACGGAGC
GCGCGCAAAC CGCCGGAGAC GACCGTGGCG GTGGACCATA TCTCGCTCAC GGTGCAACGC
GGCGAGATTT TCGGCTTGCT CGGTGCGAAT GGGTCTGGTA AATCGACTCT CATCCGGTTG
ATCTCGACGC TGCTCGTCCC CGACGGCGGC GAGATCCGCG TCTTCGGGTA CGATGTGCAG
CGTGAAGAAC GCACGGTGCG CCGGTTGATC AATCGAGTCA GCGTCGAAGC GTCGTTCTTC
AAGAAACTGT CGGCGCTGGA GAACCTGATG TACGCGGCGC GCCTCTACGA CCTGCCCGGC
GTCTATGCGC GTCGGCGCTC GGTCGAGATT CTGCGCAGCC TTGGTTTGAG CGAAAAGCGC
CTCTACGAAC CGCTGGAGCA CATGTCGCGC GGCATGCAGC AGAAGGTCGC CATTGCGCGC
GGTCTGCTCA CCTCGCCGGT GCTGCTGCTG CTCGACGAAC CGACCACCGG TCTCGACCCG
CGCTCGAAGC ACGATGTGCA ACGCTTCATC CTGCGCATGC GCGCGGAACA CGATACCACC
GTGTTTCTCA CCACGCACGA CATGGACGAA GCCGACCGTT TGTGCGACCG GATTGCGATT
ATCGATGACG GGCGGATCGT GGCGCTCGAT ACGCCGCAGG GCTTGAAGGA CGCAATCGGC
GCCCGCAACG GCAAAAATGG TTCCACAACA ATGGAGGATG TGTTCATGGC GCTGACCGGC
AAGAGTCTCG ATGACGATTT TGAGTCTGCG GACGATTTTG AGAGCGAGTA TGGGAACGAA
GCGACAGGCG GCAGCAACGG CGCACGATGA
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| Protein sequence | MSSPDIQRLA ARTDVALEVQ NAVKRFGRET AQQQPFWKRS ARKPPETTVA VDHISLTVQR
GEIFGLLGAN GSGKSTLIRL ISTLLVPDGG EIRVFGYDVQ REERTVRRLI NRVSVEASFF
KKLSALENLM YAARLYDLPG VYARRRSVEI LRSLGLSEKR LYEPLEHMSR GMQQKVAIAR
GLLTSPVLLL LDEPTTGLDP RSKHDVQRFI LRMRAEHDTT VFLTTHDMDE ADRLCDRIAI
IDDGRIVALD TPQGLKDAIG ARNGKNGSTT MEDVFMALTG KSLDDDFESA DDFESEYGNE
ATGGSNGAR
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