| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2338 |
|---|
| Symbol | |
|---|
| ID | 5539819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 3017318 |
|---|
| End bp | 3017845 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640894471 |
|---|
| Product | Ferritin Dps family protein |
|---|
| Protein accession | YP_001432439 |
|---|
| Protein GI | 156742310 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0783] DNA-binding ferritin-like protein (oxidative damage protectant) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.301965 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG AGATTGGAAC GGGACGTATC ACAACGACCC CGAAGCCTGA TATTGGCTTG
AGCGAAACGA GTATTCAGGG CGTGACCGCA ATTTTGAGCC GTTTGCTGGC GGATGAGCAC
GTGCTCTACA CCCGGTTGCG CAACTATCAC TGGAACCTGG TCGGAATGGC GTTTGGTCCG
CTTCATGCGC TGTTTCAGCA GCAGTATGAG GCGCTTGCCG ACGACATCGA CGATATTGCC
GAGCGCATTC GCATGCTGGG ACCGGCCGCG CCCGGCACGA TGACGGAGTT TCTCCAGCTG
GCGACACTCG CCGAGCATCC CGGCGACCTG CCCGATGAAC GTGGCATGGT GCGGCAATTG
GTCGCCGATC ACGAGGCGAT CATTCGCCAC CTGCGCCAGG ACCTGCGCGC CTGTGATGAG
CAGTACGACG ATATGGGCAC GAGCGACTTC CTCACGACGC TGATGGAAAA GCACGAGAAG
ATGGCGTGGA TGCTGCGCGC GCATATTGAG GAGCGCAACC AGGGCTAG
|
|---|
| Protein sequence | MSAEIGTGRI TTTPKPDIGL SETSIQGVTA ILSRLLADEH VLYTRLRNYH WNLVGMAFGP
LHALFQQQYE ALADDIDDIA ERIRMLGPAA PGTMTEFLQL ATLAEHPGDL PDERGMVRQL
VADHEAIIRH LRQDLRACDE QYDDMGTSDF LTTLMEKHEK MAWMLRAHIE ERNQG
|
|---|
| |